Pediococcus inopinatus: PI20285_04025
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Entry
PI20285_04025 CDS
T05337
Name
(GenBank) carboxypeptidase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pio
Pediococcus inopinatus
Pathway
pio00550
Peptidoglycan biosynthesis
pio01100
Metabolic pathways
pio01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PI20285_04025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PI20285_04025
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pio01003
]
PI20285_04025
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pio01011
]
PI20285_04025
Enzymes [BR:
pio01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PI20285_04025
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PI20285_04025
Glycosyltransferases [BR:
pio01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PI20285_04025
Peptidoglycan biosynthesis and degradation proteins [BR:
pio01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PI20285_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF1389
Motif
Other DBs
NCBI-ProteinID:
AVK99871
LinkDB
All DBs
Position
complement(784412..786688)
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AA seq
758 aa
AA seq
DB search
MQSNNHNSDNNQEHRTQHSQLTSPPHRRRSIFIRIILWLFSLFIIALIAGAGLFMYYAKD
APSISEKQLSSDEATVIYDKSGRVISRLGAQDRDYVKADEIPKTLKSAVVSIEDKRFYKN
NGVDPVRILGATFANISGSSLGLQGASTLTQQLVKLSVFSTSAKDRTLRVKAQEAWLAIQ
VDKKYSKDKILEFYINKVYMGNGIYGMGTAAKYYYGKSLSKLTLAQMALLAGMPQAPTSY
DPIKYPKYALSRRNTVLQAMVNNNVITKSQATTASNTNIKTGLAKNPSVSGSSTVNSKVV
DAYLKQVISSVEAKGFNPYTDGMKIYTNLDLAAQKHLYEIGNTSNYVQYPDSKFQLGVSV
TNPNNGKVVAMLGGRQTGNVTYGLNRAVQTDRSSGSTSKPLMDYGPAIQYLNWPTSRKVK
DESFTYPGTNIKLYDFDKQYQGKITMRSALVQSRNIPAIRTLQDVGISKATTFLSRLGIS
QKSTYSLQNGIGLYISPLQESAAYAAFANGGTYYKPYYVNKIVTQSGKTYHYSSKGKRAM
SKATAYMITDMLKGVISSSTGTGTTANISGLYQAGKSGTTAYPSDIADNYPSSASMDAWF
TGYTRHYSMAVWTGYDHQNTASGFLSEQETVLSQQIYRSMMSYLSTYVTNEDWVKPSSVT
EKTVNGVKELFKTNSSYSSSGTSDDYSQNNSSSSSSTPFTTSRDTSASSSSNSNSSNSSS
NSSSITSSSSSGSSSSSSSSVSSSSSTESTSSSSSSKE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtaataatcataactctgataataatcaggaacaccgcacacaacattcgcag
ctaacctccccacctcatcgacggagatccatttttattcggatcatactgtggcttttt
agtctgtttattatagccttaatcgctggagctggtctgtttatgtattacgcaaaagat
gctcccagcatttccgagaaacaactatctagtgatgaggctaccgttatttacgataaa
agtgggagggtaattagtcggcttggtgctcaagatcgagattatgtaaaagctgacgaa
attcccaaaacactaaaaagtgcagttgtttctatagaggataaacgtttctataagaat
aatggtgttgacccagtgcgaattttaggagctactttcgctaacatctctggatcatca
ttaggcttacaaggagccagcacacttactcagcaactggtcaaactttcagttttctca
acttctgccaaagaccgaacactccgggttaaggcacaagaagcgtggttagcaattcaa
gttgacaaaaaatattcaaaagataaaattctagagttttacattaacaaagtttatatg
ggtaatggtatctatggaatgggaactgcagccaagtattattatggaaaatctctttct
aaattgacacttgctcagatggcattacttgcaggtatgccacaagccccaacttcttat
gacccaatcaaatatccaaaatatgccctttcgagaagaaatactgtattgcaagccatg
gttaacaacaatgtcattacaaaatcacaagctaccacagctagcaatacgaatattaaa
actggtttggcaaagaacccaagcgtttctggttcctcaacagtcaacagtaaagtggtt
gacgcttatctaaaacaagttattagttctgttgaagctaagggatttaacccatatact
gatggcatgaaaatctatactaatttagaccttgcggcacaaaaacatctttacgaaatc
ggtaataccagtaattatgttcagtatccggattctaaattccagcttggcgtatccgtt
accaatcctaataatggtaaagtagttgctatgctcggtggacgtcaaactggcaatgta
acctacggattaaaccgggcagttcaaacagatcgaagtagtggttcaacctctaaaccg
ctgatggattacggtccggctattcaatacttgaattggccaacaagccgaaaagtaaaa
gatgaatctttcacctatccaggcacaaacattaaattatatgattttgataaacaatat
caaggtaagataacgatgcgttcagctcttgtccaatcacgaaacattcctgcaattcgt
actttacaagatgttggaattagtaaggctactaccttcctgagtagattgggaatttct
cagaaatcaacttattcattacaaaacggaattggcctatatatatctcctcttcaagaa
tctgcggcttatgcagcatttgctaacggtggaacttattataagccatactacgtaaac
aaaattgtcactcaaagtggtaaaacttatcattactctagcaagggtaagcgggccatg
agtaaggccactgcttacatgattactgacatgttaaaaggtgtcatatcaagttcaaca
ggaactgggactaccgctaatatttccggactgtatcaagcaggaaaatcaggaaccact
gcctatccatctgatattgcggataattaccctagttcagcttcaatggatgcttggttt
actggttatacgcgtcattacagtatggctgtatggactggatatgatcatcaaaataca
gcttcaggattcttaagtgaacaagaaacggtcctctctcaacaaatttacagaagtatg
atgagctacttatcaacatatgtcacaaacgaagactgggtaaaaccttcaagcgttacg
gagaaaacagtcaatggggttaaagaacttttcaagaccaattccagttatagttcatca
ggaactagcgatgattactcacaaaataattcatccagcagttcaagtacgccttttacg
actagcagagatacttcagcaagtagtagtagcaacagtaacagtagcaatagtagttct
aatagcagttctattactagttcaagttcatctggctcaagtagttcaagttcatctagt
gtaagttctagctcaagtacggaatctacttcttctagtagcagtagtaaagaataa
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