Pediococcus inopinatus: PI20285_04250
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Entry
PI20285_04250 CDS
T05337
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pio
Pediococcus inopinatus
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pio03032
]
PI20285_04250
03036 Chromosome and associated proteins [BR:
pio03036
]
PI20285_04250
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_04250
DNA replication proteins [BR:
pio03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PI20285_04250
Chromosome and associated proteins [BR:
pio03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PI20285_04250
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PI20285_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
DUF2780
Motif
Other DBs
NCBI-ProteinID:
AVK99912
LinkDB
All DBs
Position
complement(836088..836363)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAQLVDDVASKTGLTKKDAAAAVDAVFGSVQSTLAKGEKVQLIGFGNFEVRQRAARK
GRNPQTGKEIQIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagctcaattagtagatgatgttgcatcaaaaactggtttaactaaaaag
gacgctgctgcagctgttgacgctgtcttcggttcagtacaatccactttagctaaaggt
gaaaaggtacaattgatcggttttggtaacttcgaggtacgtcagcgtgctgctcgtaag
ggccgtaacccacaaactggtaaggagattcaaattcctgctagcaaagttcctgcattt
aagccaggaaaagcattgaaggatgctgttaaataa
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