Pediococcus inopinatus: PI20285_04375
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Entry
PI20285_04375 CDS
T05337
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pio
Pediococcus inopinatus
Pathway
pio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PI20285_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_04375
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PI20285_04375
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PI20285_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AVK99935
LinkDB
All DBs
Position
complement(865606..866364)
Genome browser
AA seq
252 aa
AA seq
DB search
MATQTTAQFDGIIMFRKDYRERDQLVKIFTRQFGKKMFYIRGARKRGFKLAAAILPFTKG
VYVGLIREKGLCYLNAEKSLTQFEKINEDIERNAYITYILNLIDSAFDDSVPILIWFDMA
SAALEKINAGFDPQIIAHIFELQLLPTFGVQQEWQQCIVCHRNDLPLDYSESSGGVLCQD
HWHLDPNRSHLDRRTIYYLQQLSSVNLQNVQSIQVHTETKIRLKTIIDTIYEDEVGLKLK
SKHFIDTMPSWN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaaacaactgcgcaatttgacgggattatcatgtttcgtaaagattatcgt
gagcgtgatcaattagttaaaatctttacgcgtcagtttggaaagaaaatgttttatatt
cggggcgcgcgaaaaagaggctttaagcttgctgctgctattttaccgtttactaaaggc
gtgtacgtcggcttaatccgagaaaagggattatgttatctaaatgcagaaaaatctctg
acccagttcgaaaaaattaatgaagatattgaacgtaatgcatatattacgtatatttta
aatttaattgactccgcctttgatgatagtgtgccaatactaatatggttcgatatggct
tcagcagccttggaaaagattaatgcggggtttgatcctcaaattatcgctcatattttt
gaactgcaattgctacccacttttggtgttcaacaagaatggcaacaatgtatcgtctgt
catcgaaacgatcttccccttgactattcagaatcttccggtggtgtcttgtgccaggac
cattggcatctggaccccaaccgttcacatcttgatcgccgaactatctattatttgcag
caattaagttcggtgaatttacaaaatgttcaatctattcaggtgcatacagaaaccaaa
attagattaaaaacaattattgatacgatctatgaagatgaagtgggcttaaaactaaaa
agtaaacactttattgatacaatgccttcatggaattga
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