Pediococcus inopinatus: PI20285_05180
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Entry
PI20285_05180 CDS
T05337
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pio
Pediococcus inopinatus
Pathway
pio03030
DNA replication
pio03430
Mismatch repair
pio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PI20285_05180
03430 Mismatch repair
PI20285_05180
03440 Homologous recombination
PI20285_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pio03032
]
PI20285_05180
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_05180
Enzymes [BR:
pio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PI20285_05180
DNA replication proteins [BR:
pio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PI20285_05180
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PI20285_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
BSD
Motif
Other DBs
NCBI-ProteinID:
AVL00084
LinkDB
All DBs
Position
complement(1022392..1023429)
Genome browser
AA seq
345 aa
AA seq
DB search
MKKIQYTELLKRLTAHKVDSMYLILGKENYLEQQIQEAFQKLVPEEEREMNVASYDMEVT
PLGAALDDATSAPFFGERRIIFVKNPYFLTAERHKGGPVHDVDGLQAYLDRPVETSVLVF
LASYEKLDGRKKIVKTLNNQAITIQIGNLNQNQVSQLVTAKLEENQYSIASEALEQLLFR
TDSDLSKMMNELPKLMLYNVKERTITVESVDALVSKSLDQNVFDLSNAVLQKNSKQAIDI
YQSLITQQEQPLRINAVLVSQFRLLLQVKILQNQGSSQGDIAGTLKVHPYRVKLAMQTSR
HFSMNDLTMGYTGLIDLDLQLKSTQKDPELLFELFLLQFVDQKIA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatccaatacactgaacttttaaaaagattgactgcacacaaagtggattcc
atgtatttaattttgggaaaggaaaactatcttgaacagcaaattcaagaagccttccaa
aaacttgtgcctgaagaagaacgagagatgaatgtggctagttacgacatggaagtcaca
cccttgggagctgctttggatgatgcaacttccgcgcctttttttggagagcgacgcatt
atttttgttaagaatccgtatttcttaactgctgagcgacataagggtggtccggttcat
gatgttgatggtttacaggcttatttagatcggccagttgaaacctctgttttagtcttt
cttgcgagttatgagaagttggatgggcgaaagaaaattgtcaaaaccctcaacaatcaa
gccataacaatccaaatcggcaatctaaatcaaaaccaagtcagtcaattagtgacagct
aaacttgaagaaaatcaatattcgattgcttcagaagccttggaacagttgttgtttcga
accgattctgatctaagcaagatgatgaatgagttgcctaaattgatgttatataatgtc
aaggaacgaacaattacagttgaatcagttgatgcacttgtttcaaaaagtttggaccaa
aatgtttttgatttgagcaatgcagttttgcagaaaaattcaaagcaagctattgatatc
tatcaaagcttgatcacccaacaggaacaaccacttcgaatcaatgctgtattggttagt
caatttcgcttattattacaggtcaaaattttgcagaatcagggatcctctcaaggagac
attgccggaactttaaaagttcatccatatcgagttaaattagcaatgcagactagtcgg
catttttcaatgaatgatctgacgatgggatacaccggtttgatagatttagatttacag
ttaaaatctactcaaaaagatcccgaattgttgtttgagctgtttttactccaatttgtt
gatcaaaagattgcataa
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