KEGG   Pediococcus inopinatus: PI20285_06035
Entry
PI20285_06035     CDS       T05337                                 
Name
(GenBank) hypothetical protein
  KO
K02243  competence protein ComGA
Organism
pio  Pediococcus inopinatus
Brite
KEGG Orthology (KO) [BR:pio00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pio02044]
    PI20285_06035
Secretion system [BR:pio02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   PI20285_06035
SSDB
Motif
Pfam: T2SSE nSTAND3 TsaE Rad17 AAA_2 AAA_14 AAA_22 SRP54 AAA AAA_7 RNA_helicase AAA_11 AAA_16 AAA_19 AAA_23 AAA_30 ResIII NPHP3_N AAA_25 AAA_5 DAP3 AAA_6 YqeC AAA_28 CbiA Thymidylate_kin AAA_29 MinC_N cobW
Other DBs
NCBI-ProteinID: AVL00222
LinkDB
Position
complement(1186158..1187144)
AA seq 328 aa
MKLEDYVQKFMTTCIEKRATYLYMLPRLDEYQIMYKHLNQCHIIQEVSQQTGEQLIAFFK
FQADMALSEKRRPQTGAYYWHQKDSVVHLRLSSVGDFLNRESMVIRFIYPVEGAHIQHLE
PFQWEKLVELSNKKGLLLFSGPMGSGKTTSIYQLARYLAQEKVVMTIEDPVEILEEKFLQ
LQVNNRAEMTYEQLLKVGLRHRPDIFIIGEIRDEHTANVAVKAALSGHLVLSTVHAQNAF
GVIRRLQQLNVDADMLQQALSGIAYQRLIPVRKGEVAALFDIMEGEELKEAFSGEPNQKM
TSTWGDCLEKEYQEHNISEETLLEYQEG
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaaactagaggactacgttcagaaatttatgacaacttgtattgaaaaacgagcaact
tatttgtacatgttacctaggttggatgaataccagattatgtataaacatttaaatcaa
tgtcacattattcaagaggtttcacagcaaacaggagaacaattaattgcattttttaag
tttcaagcagatatggctttgagcgaaaaaaggagaccccaaacaggggcatattattgg
catcaaaaagattctgtggttcatctgcgactctcgtcagttggcgattttttaaatcgc
gagtcgatggtcatccgattcatctatcctgttgaaggtgcccatattcagcacctagag
ccctttcagtgggaaaaactggttgaattatccaataagaaaggattgcttttgttttcg
ggtccaatgggttctggaaaaacaacttcaatttaccaattggcgcgttacttggcccaa
gaaaaagtagttatgactattgaagatccggttgaaattctggaagaaaaatttttacag
cttcaagttaataatcgtgcggaaatgacatatgagcagcttttgaaagttggtttgagg
catcgaccagatatttttatcattggtgaaattcgagatgagcatactgcaaatgtagcg
gtaaaggcagcgttaagcggtcatttagttttaagtacagttcatgcacaaaatgcattt
ggggttattagacgattgcagcaactaaacgtggatgccgatatgttacagcaggctttg
agcggaattgcatatcaacgactgatccctgttcggaaaggagaagttgcggcccttttc
gacattatggagggtgaagaactaaaagaagctttttctggagagcctaatcaaaaaatg
acgtcaacatggggagattgtcttgaaaaagaatatcaagagcataatatttcagaggaa
acactattggaatatcaagaagggtaa

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