Pediococcus inopinatus: PI20285_06220
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Entry
PI20285_06220 CDS
T05337
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pio
Pediococcus inopinatus
Pathway
pio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PI20285_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_06220
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PI20285_06220
RecFOR pathway proteins
PI20285_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
HHH_3
DUF5970
Motif
Other DBs
NCBI-ProteinID:
AVL00254
UniProt:
A0ABZ0Q4P4
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All DBs
Position
complement(1225156..1225749)
Genome browser
AA seq
197 aa
AA seq
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MYEYLIGYVTQITPEFLVLEVQGVGYKLFVGNPYRYEIDKNKLVKIFVHEAVSETEISLY
GLYDAEDKELFEKLILVKGIGPKSALAILANEDHSGLVNAINQDDVAYLKKFPKIGPKAA
QQIILDLKGKMTLLSSSSTEPVVQPIANRNLADALDALSALGYSSKVIAKIKPELEDQES
MTTDHYLSFGLKLLMKK
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaatatttaattggttatgtgacccaaatcacaccggagtttttggtgctggaa
gtgcaaggtgtaggatacaaactctttgtgggaaatccatatcggtatgaaattgataaa
aataaactagtgaaaatctttgtgcacgaggctgtttcggaaacagaaattagtctttat
gggttgtatgatgctgaagataaagaactatttgaaaaattaattttggttaaggggatt
ggacctaagagtgccttagcaattcttgcaaacgaagatcattctggtctagttaatgca
attaatcaagatgatgtagcttacttaaagaagtttccaaaaattgggcccaaggccgct
caacagattattttggacttaaaaggaaaaatgaccttactttctagtagttccacagaa
cccgtagtccaaccaatagctaatcgtaatttagcagatgctttggatgcgttgtctgct
ttaggatattcctcaaaagttattgcaaaaatcaaaccagagctagaagatcaagaatca
atgactacagatcattatttgagttttggacttaagctattaatgaaaaaatag
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