Pediococcus inopinatus: PI20285_06230
Help
Entry
PI20285_06230 CDS
T05337
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pio
Pediococcus inopinatus
Pathway
pio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PI20285_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_06230
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PI20285_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_28
AAA_14
nSTAND3
AAA_22
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVL00256
UniProt:
A0ABZ0Q4V4
LinkDB
All DBs
Position
complement(1227787..1230426)
Genome browser
AA seq
879 aa
AA seq
DB search
MPQKTSDTPMMQQYMAIKKDYPDAFLFYRIGDFYELFYDDAIKGAQILELTLTSRSHNAT
DPIPMCGMPHHAVQNYVDILIEKGYKVAICEQMEDPRLAKGMVKREVIQLITPGTVTDSN
VNEAKSNNYLTALTTTEDNKFGFAYADLSTGELKTSNLESFEAVINEVVNLQSKEIVVDA
SVTDDMQEQFKKLNIMVSHQNKIEVKAELSYLTQALTENLEKTVVETLLTYITVTQKRSL
AHLQKAVAYEPSYYLRMDHYSKYNLELTRSIRSGKKQGTLLWLLDETRTAMGGRLLKQWL
DRPLIRQVEIEDRQTKVAELLDHYFERSSLQEELVKVYDLERLAGRVAFGNVNGRDLIQL
KTSLRQIPKIKYVLGELDNKVFGAMLAKLDPVDDIADLIDRAIVDEPPISVTEGNVIKDG
YDTQLDKYRDAMTNGKKWMAELQASERQATGIKNLKVGYNKVFGYYIEITKSNLSTVPEG
RYERKQTLTNAERFITPALKEKESLILEAEEKSTTLEYELFSKIREQIKQVIERLQKLAK
QVATLDVLQSFAVVSENYHFVKPTLKKNHSIDIVGGRHPVVEKVMGRQSYVPNDVKMSKD
VDILLITGPNMSGKSTYMRQLALTVVLAQMGCSVPAESATLPIFDQIFTRIGAADDLIAG
QSTFMVEMQEANRAIQNATPQSLILFDEIGRGTATYDGMALAQAIIEFVHNHVHAKTLFS
THYHELTALDKTLTKLKNVHVGAVEKDGDLVFLHKMEDGPADKSYGIHVAKLAGMPTELL
GRADKILKRLEIQNKDTDQVITDEVAHPSKTVPTEQDSELTQSVEKSEVDEQLALFKTEP
VDPENAEVVSQIRNLNLMSMTPMDVMNQLYKWQKKLTNK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
ttgccacaaaaaacgagtgatacgccaatgatgcagcaatatatggcgattaaaaaagat
tatccagatgcttttttattttatcgaattggtgatttttatgaacttttctacgatgat
gcgatcaagggtgctcaaattcttgaactaacactaacttctcgtagtcataacgcgaca
gatcccattccgatgtgtggaatgcctcatcatgctgttcaaaattacgttgatatttta
attgaaaagggatataaagtagctatttgtgaacaaatggaagaccctcgtttggctaaa
ggcatggtcaaacgtgaagttattcaattgataacacctggaacagttacggattctaac
gtcaatgaagccaaatccaataattatttaactgctttgaccacgaccgaggacaacaag
tttggttttgcctatgcagatttatcgactggtgaactgaaaactagtaatttggagtct
tttgaagctgtaattaacgaggttgttaatctacagtcgaaggaaatcgtggtagatgca
tctgttacagatgatatgcaagaacagtttaaaaaattgaatattatggtttcacaccaa
aataaaattgaagtgaaggccgaattaagttatttaacgcaagccctaactgaaaatttg
gaaaagaccgttgttgaaacattactgacgtacatcacggtaacgcaaaaacgaagcctc
gcacatttgcaaaaagcggtggcctatgagccttcttactatttacggatggaccattat
tctaaatataatttggaattgacaagatctatccgctcaggcaagaaacagggtacactt
ttgtggttattagacgaaactcgaaccgcaatgggtggtcgattactgaaacaatggtta
gatcggccactaattcggcaagtggaaattgaagatcggcaaacaaaagtggccgagtta
ctggatcattattttgaacgcagtagtttacaagaggaattagtaaaagtttatgatttg
gagcgtttagctggtcgtgtggcatttggcaatgttaacggtagggatcttatccagtta
aagacatcactacgtcaaattcctaaaattaagtatgttttgggagaactggacaacaaa
gtttttggcgctatgctggctaaacttgatccagttgatgatattgcggatcttattgac
cgggcaattgtggatgagccacccatttcagtcactgaaggtaatgtaattaaagatggt
tatgatactcaacttgataagtatcgagatgcaatgacgaatggaaaaaagtggatggct
gaactgcaggcctccgaacgccaagcgaccggtatcaagaatttaaaagttggttacaat
aaagtttttggatattacatcgaaatcacaaaatcgaatttgagtacggttccagaaggg
cgttacgaacgcaagcaaactttaacaaatgctgagcgctttatcacgccagccttaaaa
gagaaagaaagcttgattctagaggccgaagaaaaatctactacacttgaatatgagctg
ttcagtaaaatccgtgagcaaatcaaacaagttattgaacgactgcaaaaactggctaaa
caggttgctacgcttgatgttttacagagctttgcagttgttagtgagaactatcatttt
gtaaaacctactctgaaaaaaaatcatagcattgatattgtcggtggccgtcatccggtt
gtcgaaaaagttatgggacgccaaagttatgtgccaaatgatgtcaaaatgtcaaaggat
gttgatattttgctgattacggggcctaatatgtctggtaaaagtacgtacatgcgtcaa
ttagctttaacggttgttctggcacaaatggggtgttctgttcctgctgagtcggctact
ttgccaatttttgatcaaattttcactcgaattggcgcggctgatgatttaattgctgga
caaagtacctttatggtggagatgcaagaagctaatcgggccattcagaatgcgaccccc
cagagcttgattttgtttgatgaaattggtcgaggaacggctacctatgatggcatggct
cttgcgcaagcaattattgaatttgtgcataatcatgttcacgccaaaacgttgttctct
actcattaccatgagcttacggctttagataaaacattaactaaattaaaaaacgtccat
gttggggcagttgaaaaagatggtgatctggtctttttgcacaaaatggaggatggtcct
gctgataagtcttatgggattcacgtggctaaactagcggggatgccaactgaattgttg
ggcagagccgacaaaattttaaaacgacttgaaattcagaataaagatacagatcaggtg
attacggacgaagtggcgcatccatctaaaacggtgcctactgaacaagacagtgagtta
actcagtccgttgagaagagcgaagttgatgaacaactagctttgtttaaaacggaaccg
gtagatcctgaaaatgcagaagtcgtttcccaaattcggaaccttaatctgatgtctatg
acccccatggatgtcatgaatcaactgtataagtggcagaaaaaactaacaaataaatag
DBGET
integrated database retrieval system
