KEGG   Pediococcus inopinatus: PI20285_07055
Entry
PI20285_07055     CDS       T05337                                 
Name
(GenBank) DNA/RNA helicase
  KO
K02240  competence protein ComFA
Organism
pio  Pediococcus inopinatus
Brite
KEGG Orthology (KO) [BR:pio00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pio02044]
    PI20285_07055
Secretion system [BR:pio02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   PI20285_07055
SSDB
Motif
Pfam: Helicase_C ResIII DEAD AAA_30 Helicase_RecD AAA_22 DEXQc_Suv3
Other DBs
NCBI-ProteinID: AVL00410
LinkDB
Position
complement(1391807..1393144)
AA seq 445 aa
MEKSEFFGRLVLMPRDWAITDANLQKLPTMQISENRVRCLRCHTWHLKQAVSLPRNEFYC
PSCLQLGRVSTLENFVTATEPNHFKPLETYLTWHGELTNSQKRCSKEVLQAFEHSRDHLL
WAVTGAGKTEMLFPGITDALQKGKRVCLASPRVDVCLELFPRLQDAFQNVDIALLHGHQT
DPYHYAQLTIATTHQLLRFYHAFDVLIIDEVDAFPYAQNEKLMYATKQAKKPTGMCLYLT
ATPGKALMQKVKQKQIGVSYLPQRFHGFPLPEIKPKLVFNWWKKVQNKKLPKALKRFLAE
CQQTGRQFLVFVSHINQLKVVLNAIAQNFPTLKLTTVFSADEQRLEKVQLMRDGKVDGLI
TTTILERGVTFPKIDVCVLGADDGTFSSAALVQIAGRVGRNPQRPTGTVLFICDGISKAV
NEAIHQIRFVNHKAKEESHAVSHLS
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggaaaaatcagaattctttgggagactagttttgatgccccgtgactgggcaataaca
gatgcaaacttacaaaagttgccgacaatgcaaattagcgagaatcgggtacgttgtttg
cgttgtcacacgtggcatttgaaacaagccgtttcactaccaagaaatgagttttattgt
ccaagctgtcttcaattgggtcgtgtttcgacattagaaaattttgtaaccgcaacggaa
ccgaaccattttaaacctttagagacttatttaacttggcatggtgagctcacaaatagt
caaaaacggtgttcaaaggaagttttacaggcctttgagcatagtcgagatcatctttta
tgggcggtgaccggagccggaaaaacagaaatgctttttccaggaattaccgatgccctt
caaaagggaaaacgggtttgtttggcttctccaagagtggatgtgtgtttggagcttttt
ccacgtttacaagatgcctttcaaaatgtcgatattgcgttattacacgggcatcaaact
gatccgtaccattacgcccaactcacaattgccacaactcatcagctattaagattttac
cacgcatttgatgttttgattattgatgaagttgatgcttttccgtacgcacaaaatgaa
aagttaatgtatgcgacaaaacaggctaagaagccaaccggaatgtgtctatacttaaca
gccactcctgggaaagccttaatgcaaaaagttaaacaaaaacagatcggcgtgagttac
ttaccccagcgtttccacggatttccattaccggaaataaagcccaagttggtttttaat
tggtggaaaaaggtacaaaacaaaaaattacccaaagctttaaagagatttcttgctgaa
tgccaacagacggggcgacaatttttagtttttgtgtcacatattaatcaattaaaggtg
gttttaaacgcaattgcccaaaactttccaaccttgaaactaacaactgttttttctgca
gatgaacaacgtttagaaaaagtgcaattaatgcgggatggcaaagtggacggtctaata
acgacgaccatcctagaacggggggtaacttttcctaaaattgatgtttgcgtgttgggt
gcagatgatggaaccttttcttcggcagccttagtgcagattgctggaagggtggggcgg
aacccacaacgtccaacggggaccgtattgtttatttgtgatggcatttcaaaggcggtc
aatgaagcaattcatcaaatcagatttgtgaatcacaaagcaaaggaggaatcgcatgca
gtgtctcatttgtcataa

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