Pediococcus inopinatus: PI20285_07075
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Entry
PI20285_07075 CDS
T05337
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pio
Pediococcus inopinatus
Pathway
pio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PI20285_07075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pio03019
]
PI20285_07075
03110 Chaperones and folding catalysts [BR:
pio03110
]
PI20285_07075
03029 Mitochondrial biogenesis [BR:
pio03029
]
PI20285_07075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pio04147
]
PI20285_07075
Enzymes [BR:
pio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PI20285_07075
Messenger RNA biogenesis [BR:
pio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PI20285_07075
Chaperones and folding catalysts [BR:
pio03110
]
Heat shock proteins
HSP60 / Chaperonin
PI20285_07075
Mitochondrial biogenesis [BR:
pio03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PI20285_07075
Exosome [BR:
pio04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PI20285_07075
Exosomal proteins of other body fluids (saliva and urine)
PI20285_07075
Exosomal proteins of breast cancer cells
PI20285_07075
Exosomal proteins of colorectal cancer cells
PI20285_07075
Exosomal proteins of bladder cancer cells
PI20285_07075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HAP1_N
PhaC_N
Motif
Other DBs
NCBI-ProteinID:
AVL00414
LinkDB
All DBs
Position
complement(1397557..1399188)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIKFSEDARTKMLKGVDKLADTVKSTIGPKGRNVVLEQSYGSPTITNDGVTIAKSID
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIE
RATKAAVEGLHKMSHEVKTKDDIAQVASISAANEEVGQLIADAMEKVGNDGVITIEESRG
VDTTLDVVEGMQFDRGYMSQYMVTDNDKMEADLDNPYILITDKKIGNIQDILPLLQSVVE
QSRSLLIIADDITGEALPTLVLNKMRGTFNVVAVKAPGFGDRRKAQLEDIATLTGGTVIT
DDLGLNLKDATIDQLGQANKVTVTKDDTTIVEGAGNKDQISERVATLRQQISETTSDFDK
EKLQERLAKLAGGVAVVRVGAATETELKEKKYRIEDALNATRAAVEEGFVSGGGTALVNV
IPSIADLKAEGDEQTGINIVKRALEEPVRQIAKNAGAEGSVIVENLKKQEPGVGYNAATS
KWENMVGAGIVDPTKVVRSALQNAASVSALLLTTEAVVADKPEAKDDAAAAAQPQPVGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattttccgaagatgcaagaacaaaaatgttaaaaggtgtcgac
aaattagctgacacagttaaatcaacaattggtccaaaaggtcgtaacgttgttttggaa
caatcatatggttcgcctacaattacaaatgatggtgtgacaattgctaagtcaattgat
cttgaagaccattttgaaaatatgggtgctaagttagtttctgaagttgcttcaaaaact
aacgatattgctggtgacggaacaaccactgcaactgttttaacacaagcaattgtaaat
gaaggtatgaagaacgttactgccggtgcaaatccagttggtatccgtcgcggaattgaa
cgcgcaacaaaagccgctgttgaaggcttacacaagatgtctcatgaagttaaaacaaaa
gatgatattgcccaagttgcttctatctcagctgcaaacgaagaagttggccaactaatc
gctgatgcaatggaaaaagttggtaatgatggcgtcattacaatcgaagagtcacgtggt
gtggatacaacacttgatgttgttgaaggaatgcaattcgatcgtggctatatgtcacaa
tacatggttactgacaacgacaaaatggaagctgatttagacaatccatacattttaatt
actgataagaaaattggtaatattcaagatattttgccattacttcaatcagttgtagaa
caaagtcgttcattgttaattattgccgatgatattactggtgaagctttgccaaccctt
gttttgaacaagatgcgtggtacattcaacgttgtggctgttaaagcacctggttttggc
gatcgtcgtaaagcccaacttgaagatatcgcaaccttgacaggcggaacagtcatcaca
gatgatttaggtttgaacttaaaagatgccacaattgatcaattaggccaagctaacaag
gttacagttacaaaagacgatacaacaatcgttgaaggtgctggtaataaagaccaaatc
tcagaacgagttgcgacactcagacaacagatttctgaaacaacttcagactttgacaaa
gaaaaattgcaagaacgtttagctaaattagctggcggtgttgctgttgttagagttggt
gctgcaacagaaactgaattgaaagaaaagaagtatcgaattgaagatgctttgaatgca
acacgtgctgctgttgaagaaggctttgtttccggtggtggaacagcattagttaatgtc
attccttctattgctgaccttaaagcagaaggcgatgaacaaactggtatcaacattgta
aaacgtgctcttgaagaacctgttcgtcagatcgcaaaaaatgcgggtgctgaaggttca
gtaatcgtagaaaacttaaagaaacaagaaccaggcgttggttacaatgcagcaactagc
aaatgggaaaacatggtaggcgcaggaattgtcgaccctactaaggttgttcgttcagca
ttacagaacgcagccagtgtttctgccttgttattaacaaccgaagcagttgttgctgac
aagccagaagcaaaagatgatgcagcagctgcagctcaaccacaaccagttggcatgggc
ggcatgatgtaa
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