Pediococcus inopinatus: PI20285_07290
Help
Entry
PI20285_07290 CDS
T05337
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pio
Pediococcus inopinatus
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_07290
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PI20285_07290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
ABC_tran
Lon_C
AAA_22
Rad51
SLFN-g3_helicase
AAA_14
AAA_16
nSTAND3
AAA_5
nSTAND_NTPase5
AAA
AAA_24
KTI12
AAA_19
divDNAB
AAA_30
NPHP3_N
KdpD
GvpD_P-loop
NTPase_1
ATPase_2
RUBY_RBDX
CbiA
MCM
Zn_ribbon_Thio2
NACHT
NB-ARC
ArsA_ATPase
Peptidase_S30
RD3
DUF7129
HypA
Motif
Other DBs
NCBI-ProteinID:
AVL00455
UniProt:
A0ABZ0Q340
LinkDB
All DBs
Position
complement(1436599..1437969)
Genome browser
AA seq
456 aa
AA seq
DB search
MAKAKTQFVCQNCGYVSPRFLGRCPSCGQWNTLVEERMGAEKENHKARVSFEGKRAKPQI
LSEVDMTEAPRVKTGLKEFNRVLGGGIVSGSLVLIGGDPGIGKSTLMLQISGQLSETKRR
VLYVSGEESAAQIKMRAERLHVASENFYLFPETDMTNIQDAIKKIKPSFVIIDSIQTMQE
PDIQSAVGSVAQVREVTAELMQIAKTNNITIFIVGHVTKGGAIAGPKILEHMVDTVLYFE
GDLHHTYRILRAVKNRFGSTNELGIFEMRESGLNEVANPSEIFLEERLKDATGSAIVVSM
EGTRPILVEVQALMTPTTYGNAKRTASGLDHNRVSLIMAVLEKRANFLLQNQDAYLKAAG
GVKLDEPAIDLAIAISIASSYRNIGTDPMDAFVGEIGLTGEVRRVSRIEQRVAEAQKLGF
KRIYVPKNNLQGWTPPKGIQVVGVATLSDALKRVFH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaaactcagtttgtttgtcaaaactgcgggtacgtttcacctcgtttc
ttgggtcgttgtccaagctgcggacaatggaatactttggttgaagaacgaatgggagcc
gagaaagaaaatcataaggctcgggttagttttgaaggtaaacgggctaaaccacaaatc
cttagcgaagttgatatgactgaagcaccacgagtaaagactggattaaaagaatttaat
cgtgttttaggtggtgggattgtttctgggtctttagtcctaattggtggtgatccagga
attggaaaatccactttgatgcttcaaatttcaggtcaattaagtgagaccaagcgccgc
gttttatatgtttctggggaagaaagtgccgcacaaataaaaatgcgcgccgagcgtctg
catgtagctagcgaaaatttctatctatttccagaaacagatatgacaaacattcaggat
gctatcaagaaaatcaagcctagttttgtgattattgattcgattcagaccatgcaggaa
cctgatattcagtcggcagtcggaagtgtggcacaggttcgcgaagtcacggctgaatta
atgcagattgccaaaaccaataacatcacgatttttattgttggacacgtgactaaaggc
ggtgcgattgcagggccaaaaatcctcgaacatatggtggatactgtgctgtactttgaa
ggtgatctgcatcatacttatcggattttacgggcagtaaaaaaccggtttggttcgaca
aatgaactgggaatttttgaaatgcgtgaatctggtttgaacgaagtggccaacccttca
gagattttccttgaagagcgtttgaaagatgcaactggttcggcaattgtagtatcaatg
gaaggtacacggcccattttggttgaggttcaagcgcttatgacgcccacaacctatgga
aatgctaagcggacggcaagtggattagaccacaatcgagtttcattgattatggctgtt
ttggaaaagcgggcaaacttcttgctgcaaaaccaagatgcttatctgaaggcagctggc
ggggtgaaattggatgaaccagcgattgatttggcgattgcaattagtattgcttccagt
tatcgaaatatcggaacggaccctatggatgcttttgtgggcgaaattgggctgaccggt
gaggtgcgacgggtaagccggattgagcaacgggtggcagaggctcaaaagcttggtttc
aaaaggatttacgtaccaaagaataacctgcaaggatggacaccaccaaaggggattcag
gtcgttggtgtggcaacgttgagtgatgcgttgaagcgggtgttccactag
DBGET
integrated database retrieval system
