Pediococcus inopinatus: PI20285_09655
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Entry
PI20285_09655 CDS
T05337
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pio
Pediococcus inopinatus
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pio03032
]
PI20285_09655
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_09655
Enzymes [BR:
pio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PI20285_09655
DNA replication proteins [BR:
pio03032
]
Prokaryotic type
DNA Topoisomerases
PI20285_09655
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PI20285_09655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVL00888
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Position
1951808..1954360
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AA seq
850 aa
AA seq
DB search
MADEENIGTRVTDVNLSKEMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYGMSELGV
TPDKPYKKSARIVGDVMGKYHPHGDSAIYESMVRMAQDFSYRYMLVDGHGNFGSVDGDGA
AAMRYTEARMSKIAVEMLRDINKNTVDFQENYDGTEREPKVLPARFPNLLVNGATGIAVG
MTTNIPPHNLSEIVSAIHILMDNPEATTADLMEAVPGPDFPTGGVVMGKSGIRKAYETGK
GTIIIRAKVDIEQEKSGRERIIVTELPYMVNKAKLIERIAELARDKRIEGITDVNDESDR
EGMRVVVDVRRDMSASVVLNNLYKMTLMQTTFGFNMLAIVDGAPKVLSLKQILTYYLKHQ
EEVVRRRTEFDLKKAQARAHILEGLRIALDHIDAIIAIIRNSETAEIAKDQLMNNYSLSD
KQSQAILDMRLVRLTGLEREKVENEYTKLMADIEDYRDILAHTERLNQIIYQELLDIQEK
FGDKRRTELLIGEVLSLEDEDLIDEEDVMVTLTHNGYVKRMPTSEFKSQRRGGRGVQGMG
VHDDDFIEHLVSSSTHDVLLFFTNAGKVYRMKGYEIPEYGRTAKGIPVINLLGISAGESI
QAVINAGQDRDDSEERYLFFTTLKGVAKRTPLAEFLNIRSNGLKAINLKDDDELINVAIT
DGKQNIIIGTHNGYAVSFAEASVRSMGRSATGVRGIRLRDEDYVVGVDILQPESKVLIIT
EKGYGKQTLAKEYPIKGRGGKGIKTANVTAKNGQIAGMTTVLGDEDIMLITNRGVMIRFD
VDSVPETGRATMGVHLIRIDEDSKVATMAKVDHEDEDQPDEENKDSSDQSDNSETTEKTV
TEENTDDQEK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
ttggctgatgaagagaatattggcacacgtgtaacggatgtcaatctgagtaaagaaatg
cgaacgtccttcctagattatgcgatgagtgttattgtggcgcgagctttacctgatgta
cgtgatggtttgaagccagtgcatcgccgaattttatacgggatgagcgaattaggagtt
actcctgataaaccttataaaaaatctgccagaattgttggggatgtcatgggtaaatat
catccccatggtgattcagcaatttatgaatccatggttcgaatggcacaagattttagt
tatcgttatatgttagttgatggtcatggtaactttggttcagttgatggtgatggggct
gccgcaatgcggtatacagaagcccgaatgagtaaaattgccgttgaaatgttacgtgat
atcaacaaaaatacggttgattttcaggaaaattatgatggcacagaacgggaacctaag
gtattaccagctcgttttccaaatttactggtaaatggggcaactgggattgcggtcggg
atgaccacaaatattccccctcataatttgtcagaaattgttagtgcaattcatattttg
atggacaatcccgaagcaactactgccgatttgatggaggcggtccctggacctgacttc
ccaaccggtggtgtagtgatgggtaaatccgggattcgtaaagcctatgaaactggtaaa
ggtacgattataattcgtgccaaagttgatattgagcaagagaagagtggccgtgaacga
attatcgttacggaacttccttacatggtaaacaaggctaaattgattgaaagaattgct
gaattagctcgtgacaaacgaattgaaggtattacggatgtaaacgatgaaagtgaccgt
gaaggaatgcgggttgtcgttgatgtgcgccgtgatatgagtgcatcagttgttttgaat
aacttatacaaaatgactttaatgcaaacaacctttgggttcaatatgctggcaattgta
gatggtgcgccaaaagttttgagtttaaaacaaatcttgacgtattatctcaaacatcaa
gaagaagtcgttcgtcgtcggacggaatttgaccttaaaaaggcgcaagctcgggctcac
attcttgaaggattacggattgctttggaccatatcgatgcaatcatagcgattattcgt
aattctgaaacggctgagattgccaaagatcagttgatgaataattactcattatctgat
aaacaatcacaagctattttggatatgcgactcgttcgtttaactggattggaacgcgag
aaggttgaaaacgaatatactaaattaatggcagatattgaggattaccgcgatatccta
gctcatactgaacgtttgaatcaaattatttatcaagaattacttgatattcaagaaaaa
tttggcgataaacggcgaacagagttattaattggtgaagtcttaagtcttgaagatgaa
gatttgattgatgaagaagacgttatggttacgttaacgcataatggttatgtgaaacgg
atgccaacttccgaattcaagtcgcaacgccgtggtggtcgtggtgttcaagggatgggt
gtccatgatgatgatttcatcgaacatcttgtttctagttctacgcatgatgtgttattg
ttctttaccaatgctggtaaagtataccggatgaaaggttacgaaattcctgaatacggc
cgaacagctaagggaattcctgtaattaatttactcggcattagcgctggtgaaagtatt
caagctgtcatcaatgctggtcaggatcgcgatgattcagaagaacgttatctatttttc
acgaccttgaagggtgttgccaaacggacgccattagctgaattcttaaatatccggagc
aatgggcttaaagcgattaatttgaaagatgatgatgaattaattaacgttgcaattacg
gacggcaagcaaaacatcattattggaacgcacaatggctatgcagttagttttgcagaa
gcatcagttcgttcaatgggtcgttcggcaaccggtgttcgtggcattcgattacgtgat
gaagactacgtggttggtgttgatatcctacaacctgaaagtaaagttttgattattact
gaaaaaggttatgggaaacaaacattagctaaagaatatccaattaagggccgtggcggt
aaaggaatcaagacagccaatgtgactgctaaaaacggtcagatagctgggatgacaacc
gtgcttggtgatgaggatatcatgctaattaccaatcgaggcgttatgattcgatttgat
gtagattcagttccagaaactggtcgtgcaacaatgggggttcatctaattagaattgat
gaagattctaaagttgcaacaatggctaaagttgatcatgaagatgaagatcaaccagat
gaggaaaataaagattcatctgatcaatctgacaatagcgagacaactgaaaaaacagtt
actgaagaaaatactgacgatcaagaaaaataa
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