Picosynechococcus sp. PCC 11901: FEK30_02375
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Entry
FEK30_02375 CDS
T10163
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pip Picosynechococcus sp. PCC 11901
Brite
KEGG Orthology (KO) [BR:
pip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pip03032
]
FEK30_02375 (topA)
03400 DNA repair and recombination proteins [BR:
pip03400
]
FEK30_02375 (topA)
Enzymes [BR:
pip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FEK30_02375 (topA)
DNA replication proteins [BR:
pip03032
]
Prokaryotic type
DNA Topoisomerases
FEK30_02375 (topA)
DNA repair and recombination proteins [BR:
pip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FEK30_02375 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Wtap
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QCS48374
LinkDB
All DBs
Position
complement(261733..264375)
Genome browser
AA seq
880 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPKGYHVTASMGHIRDLPSSAEEIPKEQKGQPWSQLGVNVE
NNFAPLYIVPKKKKKVVTELKQALKEADELILATDEDREGESISWHLLEVLKPKVPIKRM
VFHEITQEAIQKALTNCREIDENLVHAQETRRILDRLVGYTLSPLLWRKIAKGLSAGRVQ
SVSVRLLVQRERERQAFQSANYWDLKAELLQKKSKFEAKLITLGGKKLASGSDFDAATGK
LSKGKKVVVLSQAEAIALKERLQDQPWTVSKTEEKPSTRRPSPPFTTSTLQQEANRKLGI
SARDTMRTAQKLYEEGYITYMRTDSVHLSEQAIAAARSCVAEKYGTEYLSPKVRQYKTKS
KGAQEAHEAIRPAGNTFRTPQETGLSGRELALYDLIWKRTVACQMADARLTQLSVILKVD
DAEFRSAGKRIDFPGFFRAYVEGSDDPDAALENQEVVLPDLKEGDQPTCKKLEEVDHNTQ
PPARYTEASLVKALESKGIGRPSTYATIIGTIVDRGYVQIRDKALTPTFTAFAVTALLEE
HFPNLVDTDFTSQMEQTLDEIATGKAQWLPYLKNFYLGDDGLGTQVKVREENIDPATAKA
IAIENLPVKVKIGRFGPYIEAANGEETITASLPADLTPADLDPEQVETILKQKTEGPEQL
GTHPETGDPIYLLVGSYGPYVQLGEVTEEKKKPKRASLPKTVKPEELTLQMAVDLLALPR
LLGEHPETNKPVKVGLGRFGPYVVHDQGKEGKDYRSLKKEDNLFTIDFERAMELLAQPKR
SRGRGKTKTPLKELGKHPADNEPVNVYEGPYGIYVNHLKVNAGLPEGETVETITLEKALE
LIAEKAGSKATKKRSTTKKKTTTKKTTAKKTTSRKTKTSS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccttgtcatcgttgaatccccgaccaaagcccgtaccattcggaactatcta
ccgaagggatatcatgtgacggcatccatgggccatatccgcgatttaccctcctctgcc
gaggaaatccccaaggaacaaaaagggcagccctggtctcagcttggggtcaatgtggaa
aacaacttcgcgcccctctacatcgtgccgaagaaaaagaagaaagttgtcaccgaactc
aagcaagccctcaaagaagccgatgagttaatcctggcgacggacgaagaccgcgaaggg
gaaagtattagctggcatttgctcgaagtgctcaagcccaaggtgccgattaaacggatg
gtcttccatgaaattacccaagaagccatccaaaaagctttaaccaattgccgggaaatt
gacgaaaacctcgtccatgcccaggaaacccgccggattttagaccgtttggtgggctac
accctctcgcctttactctggcgcaaaattgccaagggcctctcggcgggacgggtacaa
tcggtgtctgtacgcctgttggtgcaacgggagcgggaacgacaggcatttcaatcggct
aattattgggacctcaaggcagaattactccagaagaaatcaaaatttgaggccaagctg
atcaccctcggcggcaagaaattagcgtccgggagtgattttgatgcggccacagggaaa
ctcagcaagggtaaaaaagttgtcgtcctctcccaagcagaggcgatcgccctcaaggag
cgtttacaagatcaaccttggacggtcagcaaaaccgaagaaaaacccagtacccgccgc
ccgtcgcccccctttaccacctccactctgcaacaggaagccaaccgcaaactcggtatt
tcggcgcgggataccatgcgtaccgcccagaagctctacgaagagggctacattacctat
atgcggacggactcggtgcatctttccgagcaggcgatcgccgcagcccgtagttgcgtt
gcagaaaaatacggcacagaatacctcagccccaaggtgcgccaatacaaaacgaaaagt
aaaggagcccaggaagcccatgaagcgatccggcctgcgggtaacacctttcgcacgccc
caggaaaccggcctcagtggtcgagagttagccctttatgaccttatttggaaacgcacc
gtcgcctgtcagatggccgatgctcgtctcactcaactgtcggttattctcaaggtcgat
gatgccgagttccgctctgctggtaaacgcattgattttccgggttttttccgggcctat
gtggaaggctctgatgatcccgatgctgccctcgaaaaccaagaagtggtgctccccgat
ctcaaggaaggagaccaacccacctgcaaaaaattagaagaagtcgatcacaatactcaa
cccccggcccgttataccgaggccagtttggtcaaagccctcgaaagtaaaggcattggt
cgccccagcacctacgccacaatcatcggcaccatcgttgatcgcggttatgtgcaaatt
cgcgataaagccttgacccccacctttacggcctttgcggtgacggccctcctggaggaa
catttccccaatctggtggatacagatttcacctcccaaatggaacagaccctcgatgag
attgccaccggcaaagcccaatggttaccctatctaaaaaatttctacctcggagatgat
ggcctgggtacccaagtaaaagtgcgcgaggaaaatattgatccggccactgcgaaggcg
atcgccatcgaaaacctccccgtgaaagtcaaaattggtcgctttggcccctacattgaa
gctgctaacggcgaagaaacgatcactgcatccctaccagcggacttaacccccgccgat
ctcgatccggagcaggttgaaaccatcctcaaacaaaaaaccgaaggccccgaacaattg
gggacgcaccctgaaacaggcgatcccatctacttacttgtgggtagctatggcccctac
gttcaactgggcgaagtcaccgaagagaagaaaaagcccaagcgtgcttcccttcccaaa
accgttaagcctgaagagctcaccctacagatggctgtggatctgttagcgttgccgcgc
ttattgggagaacatcccgaaaccaacaaacccgtcaaagtgggtctcggtcgctttggc
ccctatgttgtccacgaccaaggaaaagaaggtaaagattatcggtctctcaaaaaagaa
gacaatctctttacgatcgattttgaacgggccatggaactattagcgcaaccaaagcgt
tcccgtggccggggcaaaacaaagacgcccctgaaggaactagggaaacatcccgctgat
aacgaaccagtcaatgtttatgaaggcccctatggtatctacgtgaatcacctaaaagtg
aatgcaggtttgccagaaggagaaaccgtagaaacaattaccctcgaaaaggccctcgaa
ctaatcgccgaaaaagcgggtagcaaagcaaccaagaagcgttcgacgacaaaaaagaaa
acgacgacgaaaaaaacaacagcaaaaaaaaccaccagccgtaaaacaaaaacttcttca
tga
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