Picosynechococcus sp. PCC 11901: FEK30_06960
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Entry
FEK30_06960 CDS
T10163
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pip Picosynechococcus sp. PCC 11901
Brite
KEGG Orthology (KO) [BR:
pip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pip03016
]
FEK30_06960
Enzymes [BR:
pip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FEK30_06960
Transfer RNA biogenesis [BR:
pip03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FEK30_06960
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QCS49194
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All DBs
Position
1238594..1240606
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AA seq
670 aa
AA seq
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MEKGQLIEFRLQGERVLAVAERPEGKKDWIVIDGRGQSHKLRPQRVEYTVAGSPYDPTEI
PSFFTESQALVDPDNLAVAWEFLVEASEPATPESLAQLLFSAKTPQQCYACHLMLAEDKI
FFKRKGDYYEPRAEAQVREIQHQLEVEAQKEREKTEFLQRVNQAIAGETVTWEDSDRQRF
ESLEKFVLYPEQSARAAHDLLEMLGRSPTTEQAFRLLVSLGWWSSHENLALLRSGYPRKF
SQKVLDVSHARLSASPGDTDEGNRIDLTHLKTYTIDDESTSEIDDGLSIETLESGCHKVW
IHIADPTRLLSPGDELDLEARRRSTSLYLPTGMISMFPEELATGPMSLRQGQVCAALSFG
VLLTENGAIADYEITPSWVKPTYRLTYDDVDEMLHLRIQAESEIALLADFAHKRRKWRDA
QGSISIKMPEASIKVQDENIFIEVLHASMSRELVAEMMILAGEVAGHYGRTHSLPLPFRG
QPQPELPPQEELLLLPAGPVRACAVRRCMPRSEMGTNPVRHASLGLDSYIQVTSPIRRYT
DLLAHFQIKAHLRGDELPFSVDELKEILYSVVTSSQEAVHVERQTNRYWSLEYLRRNADQ
VWQGLVLRWLREDEKLGIILLEELGLELPHRFERAVALGDRLEVKVSQADPHKDEIRFRE
LLETEIAAAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaggacaactgattgagtttcggctacagggagaacgagtacttgctgtcgct
gagcgtcctgaaggaaaaaaagattggatcgtaatcgatggacgggggcaatcccataag
ctgcgtccccaaagggttgaatataccgtggcgggttccccctacgatccaactgagatc
cccagctttttcacagagagtcaggcattagttgatcccgacaatctggccgtcgcctgg
gagtttcttgtcgaagcctcggaaccggcaaccccagaatccctcgcgcaacttttgttt
tcggccaaaacgccccagcaatgttatgcctgtcatctgatgctggcggaagataagatt
ttcttcaaacgcaaaggggattactatgaaccccgtgcagaggcgcaggttcgcgaaatt
cagcatcagctagaagttgaagctcagaaagaacgtgaaaaaacagaatttttacagcgg
gttaaccaggcgatcgccggagaaacagtaacctgggaagacagtgatcggcaacgtttc
gaaagcctagaaaaatttgtcctctacccggagcagtcagccagagccgcccacgacctc
ctcgaaatgctggggcgatcgcccacgacagaacaggctttccgcctcttggtctccctt
ggctggtggagttcccacgaaaatcttgctctcctccggagcggttaccccagaaaattt
tctcagaaggtactcgatgtgtcccatgcccgcctgtcagcctcgcccggtgataccgat
gaggggaaccgtatcgatttaacccatctcaagacctacaccattgacgatgagagtacc
tcagaaattgacgatggcctcagtatcgaaaccctagaaagcggttgccataaagtttgg
attcacatcgcggatcccacacgactattgagccctggagatgaactcgatctagaagcc
cgacgtcgtagtaccagcctctatttacccacggggatgatctccatgttcccggaagag
ctggcgacggggccgatgagcttacgccaaggtcaggtctgtgccgccctcagttttggg
gttttgctcacagaaaatggggcgatcgccgattatgaaatcacccccagttgggtcaag
cccacctatcgcctcacctatgacgatgtggacgaaatgctccatctgcggatccaggcc
gaatcagaaatcgctcttcttgcggattttgcccacaaacgccgaaagtggcgggatgcc
caaggctccatcagtattaagatgccagaagcctccattaaggtgcaggacgaaaacatt
tttatcgaagttctccatgcctccatgtcccgggaactggttgctgaaatgatgatcctc
gctggcgaagtggcaggccattatggacggacccatagtttaccgctgcctttccgggga
caaccccaaccagaactgcccccccaagaggaactgttattattacccgctgggcctgtg
cgcgcctgtgcggtacggcgttgtatgccccgcagtgaaatgggcaccaatcctgtacgc
catgccagtttggggttagattcctatattcaagtcacatcccccattcgtcgttacact
gacctgttggcccatttccaaattaaggcccatctgcggggggatgaactgcctttctcg
gtggatgaactcaaggaaattctctacagcgttgttacttccagtcaggaagctgtccat
gtagagcgccaaaccaaccgctattggagcctcgaatatttacgtcgtaatgcggatcaa
gtgtggcaagggttagtcctacgctggctccgggaagatgaaaagttaggcattatcctc
ctggaagaactgggcctagaacttccccatcgctttgaacgggccgttgccttaggcgat
cgcctggaagtaaaagtaagccaagccgatccccataaagatgaaattcgcttccgggaa
ctactcgaaacggagattgcggcggcttcctag
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