KEGG   Picosynechococcus sp. PCC 11901: FEK30_06960
Entry
FEK30_06960       CDS       T10163                                 
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
pip  Picosynechococcus sp. PCC 11901
Brite
KEGG Orthology (KO) [BR:pip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pip03016]
    FEK30_06960
Enzymes [BR:pip01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     FEK30_06960
Transfer RNA biogenesis [BR:pip03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FEK30_06960
SSDB
Motif
Pfam: RNB HTH_RNase_II CSD_RNase_II RNase_II_C_S1
Other DBs
NCBI-ProteinID: QCS49194
LinkDB
Position
1238594..1240606
AA seq 670 aa
MEKGQLIEFRLQGERVLAVAERPEGKKDWIVIDGRGQSHKLRPQRVEYTVAGSPYDPTEI
PSFFTESQALVDPDNLAVAWEFLVEASEPATPESLAQLLFSAKTPQQCYACHLMLAEDKI
FFKRKGDYYEPRAEAQVREIQHQLEVEAQKEREKTEFLQRVNQAIAGETVTWEDSDRQRF
ESLEKFVLYPEQSARAAHDLLEMLGRSPTTEQAFRLLVSLGWWSSHENLALLRSGYPRKF
SQKVLDVSHARLSASPGDTDEGNRIDLTHLKTYTIDDESTSEIDDGLSIETLESGCHKVW
IHIADPTRLLSPGDELDLEARRRSTSLYLPTGMISMFPEELATGPMSLRQGQVCAALSFG
VLLTENGAIADYEITPSWVKPTYRLTYDDVDEMLHLRIQAESEIALLADFAHKRRKWRDA
QGSISIKMPEASIKVQDENIFIEVLHASMSRELVAEMMILAGEVAGHYGRTHSLPLPFRG
QPQPELPPQEELLLLPAGPVRACAVRRCMPRSEMGTNPVRHASLGLDSYIQVTSPIRRYT
DLLAHFQIKAHLRGDELPFSVDELKEILYSVVTSSQEAVHVERQTNRYWSLEYLRRNADQ
VWQGLVLRWLREDEKLGIILLEELGLELPHRFERAVALGDRLEVKVSQADPHKDEIRFRE
LLETEIAAAS
NT seq 2013 nt   +upstreamnt  +downstreamnt
gtggaaaaaggacaactgattgagtttcggctacagggagaacgagtacttgctgtcgct
gagcgtcctgaaggaaaaaaagattggatcgtaatcgatggacgggggcaatcccataag
ctgcgtccccaaagggttgaatataccgtggcgggttccccctacgatccaactgagatc
cccagctttttcacagagagtcaggcattagttgatcccgacaatctggccgtcgcctgg
gagtttcttgtcgaagcctcggaaccggcaaccccagaatccctcgcgcaacttttgttt
tcggccaaaacgccccagcaatgttatgcctgtcatctgatgctggcggaagataagatt
ttcttcaaacgcaaaggggattactatgaaccccgtgcagaggcgcaggttcgcgaaatt
cagcatcagctagaagttgaagctcagaaagaacgtgaaaaaacagaatttttacagcgg
gttaaccaggcgatcgccggagaaacagtaacctgggaagacagtgatcggcaacgtttc
gaaagcctagaaaaatttgtcctctacccggagcagtcagccagagccgcccacgacctc
ctcgaaatgctggggcgatcgcccacgacagaacaggctttccgcctcttggtctccctt
ggctggtggagttcccacgaaaatcttgctctcctccggagcggttaccccagaaaattt
tctcagaaggtactcgatgtgtcccatgcccgcctgtcagcctcgcccggtgataccgat
gaggggaaccgtatcgatttaacccatctcaagacctacaccattgacgatgagagtacc
tcagaaattgacgatggcctcagtatcgaaaccctagaaagcggttgccataaagtttgg
attcacatcgcggatcccacacgactattgagccctggagatgaactcgatctagaagcc
cgacgtcgtagtaccagcctctatttacccacggggatgatctccatgttcccggaagag
ctggcgacggggccgatgagcttacgccaaggtcaggtctgtgccgccctcagttttggg
gttttgctcacagaaaatggggcgatcgccgattatgaaatcacccccagttgggtcaag
cccacctatcgcctcacctatgacgatgtggacgaaatgctccatctgcggatccaggcc
gaatcagaaatcgctcttcttgcggattttgcccacaaacgccgaaagtggcgggatgcc
caaggctccatcagtattaagatgccagaagcctccattaaggtgcaggacgaaaacatt
tttatcgaagttctccatgcctccatgtcccgggaactggttgctgaaatgatgatcctc
gctggcgaagtggcaggccattatggacggacccatagtttaccgctgcctttccgggga
caaccccaaccagaactgcccccccaagaggaactgttattattacccgctgggcctgtg
cgcgcctgtgcggtacggcgttgtatgccccgcagtgaaatgggcaccaatcctgtacgc
catgccagtttggggttagattcctatattcaagtcacatcccccattcgtcgttacact
gacctgttggcccatttccaaattaaggcccatctgcggggggatgaactgcctttctcg
gtggatgaactcaaggaaattctctacagcgttgttacttccagtcaggaagctgtccat
gtagagcgccaaaccaaccgctattggagcctcgaatatttacgtcgtaatgcggatcaa
gtgtggcaagggttagtcctacgctggctccgggaagatgaaaagttaggcattatcctc
ctggaagaactgggcctagaacttccccatcgctttgaacgggccgttgccttaggcgat
cgcctggaagtaaaagtaagccaagccgatccccataaagatgaaattcgcttccgggaa
ctactcgaaacggagattgcggcggcttcctag

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