Picosynechococcus sp. PCC 11901: FEK30_09350
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Entry
FEK30_09350 CDS
T10163
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pip Picosynechococcus sp. PCC 11901
Pathway
pip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FEK30_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pip03019
]
FEK30_09350
03400 DNA repair and recombination proteins [BR:
pip03400
]
FEK30_09350
Enzymes [BR:
pip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FEK30_09350
Messenger RNA biogenesis [BR:
pip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FEK30_09350
DNA repair and recombination proteins [BR:
pip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FEK30_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
Cas3-like_C_2
ResIII
DUF5537
Motif
Other DBs
NCBI-ProteinID:
QCS49630
LinkDB
All DBs
Position
1711729..1713174
Genome browser
AA seq
481 aa
AA seq
DB search
MTQTWAQVQHTFQQIWGYDDFRPPQDQIIRSLLAGQDALIIMPTGGGKSICFQLPAILQT
GLTLVVSPLVALMENQVQTLQAKRLSARLLHSQLSKLERRQTLQAVAKNQLRLLYLSPET
LLSPPVWEILIQPQLKVNGLILDEAHCLVQWGDTFRPAYRRLGAVRPALLRHKPKGTKMA
IAAFTATADPQAQKSISQTLQLKSPKKFVESPYRPNLQLASRTVWSPKGKRDQLHRLLQT
NAKASGLIYVRSRREAETLAMTLGQQNYQTAAYHAGLSPGDRRQQEKDWQTGRLQFVVCT
NAFGMGIDKADVRWILHYHPPSLLAEYLQEIGRAGRDGKKSTALSLVSEPTGLLNPEDKN
RTRFFQQNLQKQIRHAAKLAQTLPLQGSILELDHQAELSLGILHSTGQLCWRDPFTYERQ
PTLDPKAFTILRQQQIHAVRQLQTFWQQKTCRWQFLIDSFGFHDQAKDFRCGHCDRCQNS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacttgggcgcaggtacagcacaccttccaacaaatttggggctatgacgat
tttcggccaccccaggatcagattatccgcagtttactcgccggacaggatgctttgatt
atcatgcccaccggtggcggcaaatccatttgttttcaactaccggctattttacaaacg
ggcctgaccctggtggtttctcctctggtggccctcatggaaaatcaggtgcaaactctc
caggcaaaacgcctctcggcccgactcctccacagtcagttatcaaaattagagcggcgg
caaaccctgcaggcggtggcaaaaaatcagttgcgcttgctctatctatcgccagaaacc
cttttaagtcccccggtttgggaaatactgattcaaccccagctaaaggtgaatggttta
atcctcgatgaagcccattgtctggtgcagtggggagatacctttcgtccggcctatcgc
cgcttaggggctgtccgtcccgccttactacgccacaaacccaagggcacaaaaatggcg
atcgccgcttttacggccaccgctgatccccaagctcaaaagagtatcagccaaaccctg
cagctcaagagtcccaaaaaatttgtcgagagtccctatcgccccaatttacagttagcg
agccgcaccgtttggagtcccaagggcaaacgagaccagttgcaccgattgctacaaacc
aatgccaaggcgtcggggttgatttatgtccggtcgcggcgggaagcggaaaccctagcc
atgaccctggggcaacaaaattatcagacagcggcctaccatgcaggtcttagtccaggc
gatcgccgccaacaggaaaaagattggcaaacggggcgcttacaatttgtcgtttgtact
aatgcctttgggatgggcattgataaagctgatgtgcgctggattcttcactaccatccc
cctagtcttctggcggaatatctccaggaaattggtcgcgccggccgcgacggtaaaaaa
agcacagccctaagtttggtcagtgaacccacgggccttttaaacccggaggataaaaat
cgcacgcgcttttttcaacaaaatctccaaaagcagatccgccacgccgcaaaattggcc
cagacccttcctctccagggcagcattttagaactcgatcaccaggcagaattaagccta
gggattttacacagcaccgggcaactctgctggcgggatccgtttacctacgaacgtcag
ccaaccttagatccgaaagccttcacgattctgagacagcaacaaatccacgctgttcgc
cagctacaaaccttttggcaacaaaaaacctgccgctggcaatttttaatcgacagtttt
ggtttccatgaccaggccaaagacttccgctgtggccattgcgatcgctgtcagaactct
tcatga
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