KEGG   Picosynechococcus sp. PCC 11901: FEK30_10545
Entry
FEK30_10545       CDS       T10163                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pip  Picosynechococcus sp. PCC 11901
Pathway
pip03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pip00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FEK30_10545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pip03019]
    FEK30_10545
Messenger RNA biogenesis [BR:pip03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FEK30_10545
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 SipA
Other DBs
NCBI-ProteinID: QCS50918
LinkDB
Position
complement(1968917..1970647)
AA seq 576 aa
MKIIPLGGLHEIGKNTCVFEYDDEIVLLDAGLAFPTDGMHGVNIVLPDTTYLRENRHKIK
GMIVTHGHEDHIGGISHHLKQFDIPVIYGPRLAMSLLSDKLDEAGVSDRTKLHSVMPRDM
VRIGKNFLVEYIRNTHSIADSFTVAIHTPIGVIIHTGDFKVDFTPVDGEQFDFQRLAEHG
EKGVLCLLSDSTNAEVPGRTPSEASVKPNLDRIFGQAQGRLFVTTFASSVHRVSIILELA
QKHNRKVAVVGRSMLNVISHARNLGYMKCLDELFIPLRQLKSMKDEDVLILTTGSQGETL
SAMTRISHDAHRHIKVKEGDTVVFSANPIPGNTIAVVNTIDRLMMRGAKVIYGKGEGIHV
SGHGAQDDHKLMLALTKPKFFIPFHGEHRMLVKHAQTAQSMGVPEENIVIIDNGDIVELT
EDSIGVTGKVPSGIELVDRSGIVHDSVLQERQQLAEEGVITVAVAIAQDGNLIAPPEIHL
RGVVTAANNKLLHQLIQRNVENVLEDRLAEYKEHGKRSNEDIDWTDIRLEIEASLQRLAR
RELQGEPLVVFLMQVSEQTAVRTQRRRRRPTASLAS
NT seq 1731 nt   +upstreamnt  +downstreamnt
attaaaattattcccctgggtggtctccacgaaattggtaaaaacacctgtgtttttgaa
tatgacgatgaaatcgtgctgcttgatgcgggactagcctttccgacggatgggatgcac
ggggtcaacattgttctgccagatacaacctatctccgggaaaaccgccacaaaattaag
gggatgattgtcacccacggccacgaagatcacattggtggtatttcccatcacctcaag
cagtttgatattcccgtcatctatggcccccgcctagccatgtctctgctgtccgacaaa
ctagatgaagcaggcgtaagcgatcgcaccaaactccacagcgtcatgccacgggacatg
gtgcgcattggtaaaaatttcctcgtagaatacattcgcaatacccactccattgccgat
agctttaccgtggcgatccatacccccatcggcgtgattattcacacaggggacttcaaa
gtagactttacccctgttgacggtgaacagtttgattttcagcggctcgctgagcatggc
gaaaaaggtgttctctgtcttttaagtgattcgacgaacgccgaagttcccggtcgcacc
ccttcggaagcctcagtgaagccgaatttagacagaatctttggtcaggcccaaggacga
ctctttgtgacgacctttgcctcttctgtccaccgggtcagcattattttagaactggcg
caaaaacacaatcgtaaggtggctgtggtgggccgttccatgctaaacgtcatttcccat
gcccgcaatttaggctacatgaaatgtttggatgagctgtttattcccctgcggcagctg
aaaagcatgaaggatgaggatgttttgatcctgacaacgggttcccaaggtgaaacccta
tcggccatgacacggatctcccacgatgcccaccgccacatcaaagttaaggaaggggat
acggtggtcttttcggccaatccaatccctggcaatacgatcgccgtggtcaataccatt
gatcgtttgatgatgcgcggcgcgaaggtcatctacggtaaaggggaaggaatccacgtt
tctggccacggcgcccaagatgatcacaagttgatgctggccttgacgaagccaaagttt
ttcattcccttccacggggaacaccggatgttggtgaagcacgcccaaacggcccaatcg
atgggggtacctgaggaaaatattgtgattattgacaatggtgacattgtcgaactcacg
gaagactccattggtgttaccgggaaagtgccttcgggaattgaattagtagaccgttct
ggtattgtccatgattcggtactccaggaacgccaacagttggccgaggaaggggtgatt
acggtggccgtggcgatcgcccaggacggtaatctaattgcgccgccagaaattcatctc
cggggtgtagttaccgcagcgaacaataagttactccaccagttaatccagcggaatgtc
gaaaatgtgttggaggatcgcctcgcagaatataaagagcatggcaagcgcagcaacgaa
gacattgactggactgatattcgcctagaaatcgaagcatccctgcaacgccttgcccgt
cgagaattacaaggggaacccctggtggtctttttgatgcaggtcagcgaacagactgcc
gttagaacccagcgccgtcgtcgtcgtcccacagcatcccttgcttcctaa

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