Picosynechococcus sp. PCC 11901: FEK30_13525
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Entry
FEK30_13525 CDS
T10163
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pip Picosynechococcus sp. PCC 11901
Pathway
pip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FEK30_13525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pip03400
]
FEK30_13525
Enzymes [BR:
pip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FEK30_13525
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FEK30_13525
DNA repair and recombination proteins [BR:
pip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FEK30_13525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QCS50358
LinkDB
All DBs
Position
complement(2586586..2587419)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETVRRGLMQISVNQRFTGAEILLRKTLAYPTDPDHFLGAIQGLVIQDWQRRGK
YLLGKLSDGSTLGIHLRMTGKFLWTTPDVPVQKHTRMRFFLAGDRELRFVDLRTFGQIWW
VPAGTIVESVITGLTRLGVEPLSPDFTADVLATCCEKRQRPMKTFLLDQSIVTGLGNIYA
DEALFKSGIHPTRKASSLKMSEIEKLHQAIVEVLETSIAQGGTTFSDFVSTTGTNGNYGG
MALTYGRTGEPCRVCSHPIERIKLGGRSTHFCPQCQG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaggtggaaaccgttcgtcgcggtttgatgcagattagtgtaaat
cagcggtttacaggggcagaaattctcctccgcaaaaccctggcctatcctacagatccc
gatcactttctaggggcaatccaaggcttggtcattcaagattggcagcgacgcggcaag
tatttactcggaaaattatccgatggctcaacccttgggattcatctgcggatgacgggg
aaatttctctggacaaccccggatgtgcctgtacaaaaacatactcggatgcggtttttc
ctggcaggcgatcgcgaactgagatttgttgacctgcgcacctttgggcaaatttggtgg
gtaccagcaggaactattgtggaatctgtaattacgggattgacacgcttgggtgtggaa
cccctttccccagattttacggcggatgtgctggctacttgctgcgaaaagcgccagcgg
ccaatgaagactttcttgcttgaccaaagcatcgtgactggcttgggcaatatctatgct
gacgaagcgctgtttaaatctggcatccatcccacccgcaaggctagcagcttaaagatg
tcagaaatcgagaagctccatcaagcaattgttgaagtgctggaaacttctattgcccaa
ggcggcactacctttagcgattttgtcagcaccacgggcaccaacggcaactatggcggt
atggccctcacctacgggcgcacgggggaaccttgtcgcgtttgcagtcatcccatcgaa
cggatcaaactcggtggacgatcgacccatttttgtccccaatgtcagggctaa
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