Picosynechococcus sp. PCC 11901: FEK30_14360
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Entry
FEK30_14360 CDS
T10163
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pip Picosynechococcus sp. PCC 11901
Brite
KEGG Orthology (KO) [BR:
pip00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FEK30_14360 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pip03021
]
FEK30_14360 (rpoD)
Transcription machinery [BR:
pip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FEK30_14360 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QCS50511
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Position
2758391..2759518
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AA seq
375 aa
AA seq
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MTQATNPVLDQTRNEGDIDYSALAEAQIKEGTDYVELTLPTKKSRKAKTSRRKETATKKK
PYTEDSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERMREQLTEHESRVPTDKEWAE
AAGMPLKDFRRRLFHGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAA
EKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELGR
KPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDQVSK
SLLREDLENVLDTLSARERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRK
LRHPNRNSILKEYIR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgacgaaccccgtactggatcagactcggaatgagggtgatattgattac
agtgcccttgcggaagcgcaaattaaagaaggtaccgactatgtagaacttaccctcccc
acgaaaaaaagtcggaaagcaaaaaccagtcgtcgtaaggaaactgccaccaagaaaaaa
ccctacaccgaagactcgattcggatttacctccaagaaattggccggattcgtctgctg
cgggctgaagaagaaattgagctggcccggaaaattgctgatttgctcgaactagagcgg
atgcgggaacaactcaccgagcatgagtctcgcgttcctacggacaaagagtgggccgaa
gccgctgggatgcccctcaaagattttcggcgtcgcttgttccatggtcgccgtgccaaa
gacaaaatggtgcaatcaaacctccgtctggtggtctccattgcgaaaaagtatatgaac
cgcggcctttcgtttcaggacttgatccaagagggttctttgggtctgatccgtgccgcc
gaaaagtttgaccatgagaagggttacaagttctctacctacgcgacctggtggattcgt
caggcgattacgcgggcgatcgccgatcaatcccgtaccattcgtctgcctgttcacctc
tacgaaaccatttcccgcatcaaaaaaaccaccaagattctttcccaggaattaggccgc
aaacccaccgaggaagagattgctgagcgcatggaaatgaccatcgaaaaactgcgcttc
atcgccaagtctgcccagttaccgatctccctcgaaacgccgattggtaaagaagaagat
tctcgcttgggtgactttatcgaagccgatggggaaacccccgaggatcaagtctccaag
agcctcctgcgggaagatcttgaaaatgtacttgataccctcagtgcccgtgagcgtgat
gtcctccgtctccgttatggcttggatgatggccgcatgaaaaccctcgaagaaattggc
caaatttttaacgtaacccgtgaacggattcgtcagatcgaagcaaaagcgctgcgtaaa
ctgcgtcacccgaaccgcaacagcatcctgaaagaatatatccgctag
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