Pirellula sp. SH-Sr6A: VN12_00805
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Entry
VN12_00805 CDS
T04360
Name
(GenBank) ATPase involved in DNA repair
Organism
pir
Pirellula sp. SH-Sr6A
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3686
AAA_5
AAA
RuvB_N
AAA_22
AAA_14
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMV30622
UniProt:
A0A142XV53
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Position
complement(242994..248228)
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AA seq
1744 aa
AA seq
DB search
MPDSQLAQGTYEVLRNRLREGAADLRGRLGKLHEERSAVFGNLETKLLSTIHVTTEHNCV
PRDLFAFQDLILLGSNVQFGLKTEIAASDIFSIYRFDGQHATSTSLGPFDDNRFHRDFAE
LVRYYKNASFLRFWLNGPNLYMVFQTGKTIASFKAFKWAIEKDAIHYVDNRSEGEIRPIP
QTSFPWKRTTRENHRPGKHPHISIEDKLFVECIHGDLTIKIEDSTEDGLGIYREPVDSPD
QTLDDAETLYAILDDLILLKIRPYQEKDYRHFVFSVKRSEAKRMDGIGNACILLPDDHGI
IMPNGFVLQSGDYKVIEHGLSSLAYDGLRRSPNGEDFLYVFTHAESGTYLQLRYNLIRQT
VDTPLVCHGQAFLADGLMLSMRADEQAQKHHAIQVWQTPFTSPDYRPMVQTDSLLFKIGN
QDLVRGMSECQEILNLIDRDDSYLGLYSDLVKRATETLDTYFWLDNPEAGELAKPIRLIR
EAAESAVNEFDKVVRVRQQSEKALADAQHEASELIKKVDRQKFDQIEQFVEGLASVRAQR
GNVVQLKELRYIDLAAVEALEKELIEFTERLGSRCVQHLLHPESLKVYQTRIGEFREHGT
QARSAAEGRKVEASFQTVGGSLELLIETVSQLKIEDTTQRTEIVDRIANVLAELNRERSL
LRAQLREVIHRELESDYASQSKLLDQSMAGALESADEPDKVDTALTRLLVQVEELEGRYA
ESDDLLLRLTEKRQVIADAFEARRVQLVEARTQRANSLVLAADRLLAGIAAKANRIEEPN
ALRAYFASDMMVEKVRGITEQLQKLGDSVRQDDVLSRLKSIGDDALRQQRDRRELLTDGN
RVIKLGQHAFSVNHQAIELTTVARGGCLQLHITGTQYFEPLDAPELEQAKDLWEVAFPSE
TPEVYRGETLAYWMSTRVDAERFLASSQEFRIQTIRDFMQTRYQDGYARGVHDQDAERIL
TELLRTQQNLGLLTTSPKTRAFAMLVWSVLVPTKEREATQQWVIASESIDKLVGVNQPST
AVRAHVRQLMESHGREIAESDSTLDDRTLDNAANFLVDTMRHPSGAFPESPESAAFHKAM
LSNLDEKRLVLLQQSLESEALGWSERWGLANRLAVGFWESRQAELSGAGIDKAYAPEVAW
RLLAAVQPVVSTAKGTSKSSASPMAKGDSTGVQGQWAKPVKIAGLIGDHPKLQGGELVFQ
YHDFASRLERHITEIVPRWEALQRTKHELVLRADKRLKTHDLKARVLTSFVRNQLIDTVY
LPRIGDNLAKQIGAAGDTKRTDRMGLLLLISPPGYGKTTLMEYIANRLGLVFVKVNGPAI
GHGVTSLDPAEAPNAASREEVERINLALEMGDNTMLYLDDIQHCNVELLQKFIPLCDATR
RIEGVWKGSSKTYDLRGRKFAVVMAGNPYNESGERFQIPDMLANRADVYNLGEIIGDSQE
AFEMSYLENCLTSNPVLQPLSRASNQDQRTLIQAALRGTTDGIDLESNLSVDDVREMTSV
LSKLHRIRDVVLTMNREYIRSAAQADDYRTEPPFKLQGSYRNMNRIAEKVVSVMNDDELN
RLIVSSYEQDAQTLSRDGESNMLKFKSLLGILNETEGARWADICKAFAQKTKLKGLSGDQ
ATAQVISSILGIQSGLDHIGAAIGSASNLWMEAASQREQKVAPEEGKPPESRVVVQHAVP
RVMTELIRSQFQLLYDGLRPVLEEVAQQRQSGERLRQSIADCLRRYEELEAKAKEGPDSI
EGEE
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgccagactcgcaacttgcccaaggaacgtacgaggtcctccgaaaccgcttgcgcgag
ggggcggcggacttgcgaggccggctcggaaagcttcacgaagagcgatcggccgtcttc
gggaacttggaaacgaagctcctgtccacgattcatgtgacgacggagcacaactgcgtt
cctcgcgatctctttgccttccaagacctgattttgctcgggagcaacgtgcagttcggt
ttgaagacggagattgcggcatcggacatcttctccatctaccgtttcgacgggcagcat
gcgacgtcgacttcgctggggccgttcgacgacaaccgctttcatcgcgactttgccgag
ctggttcgctattacaagaatgcgagctttctacgcttttggttgaacggccccaacctt
tatatggtgtttcagacagggaagacgatcgccagcttcaaagcctttaagtgggcgatt
gaaaaggacgccatccattacgtcgacaatcggagcgaaggggagatccgtccgatcccg
caaaccagtttcccttggaagcggacgacgcgcgagaatcatcgacccggtaaacatccg
cacatctccatcgaggacaagctgttcgtggagtgcattcacggcgatttgaccatcaag
attgaagacagcacggaggacgggctcggcatctatcgcgagccggtggatagtcctgac
caaacgctggacgacgcggaaacgctttatgccatcctcgacgatttgatccttctcaag
atccggccctatcaggaaaaggattaccgccatttcgttttcagcgtcaagcgatcggaa
gcgaagcggatggatgggatcggtaacgcctgcatccttctccccgatgatcacgggatc
atcatgcccaatggctttgtgcttcagtcgggggactacaaagtcattgaacacgggctt
tcttccctcgcgtacgatggcctgcgacgttctcccaacggggaagatttcctatacgtg
ttcacccatgcggaatcggggacttacctgcaactccgctacaacctcatccgacaaacg
gtcgacacgccgctcgtatgccatgggcaagcgttcttggcggacggattgatgctgagc
atgcgggcggacgaacaagctcaaaagcatcacgccattcaagtctggcaaactcctttc
accagtcccgactatcgcccgatggtccaaacggactccttgttgttcaagatcggcaat
caagacttagtgcgaggaatgtccgagtgccaagagatactcaatctcatcgatcgggat
gactcgtatttgggactttattccgatctggtaaagcgcgcgaccgaaacgctcgacacg
tatttttggctcgacaatcccgaggcgggagagttggccaagcccatccgcttgatccgc
gaggcagcggagtcggcggtcaacgaattcgacaaagtcgttcgagttcggcagcaatcg
gaaaaggcgctggcagacgctcagcacgaagcgtcggagctgatcaaaaaagtagatcga
cagaagttcgatcagatcgagcagttcgtcgaagggctagcgagcgttcgcgcgcagcgt
gggaatgtcgttcagttgaaggagttgcgatacatcgatctggccgcggtcgaggccttg
gaaaaggagttgatcgagtttaccgaacggttgggaagtcgatgcgtccaacatttgctt
catcctgaatctttaaaggtttatcagactcgcattggggagttccgagaacacggcacg
caggccagatcggcggcggaaggaaggaaagtcgaagcgagttttcaaacggtaggtggg
tcgctcgagttgctcattgaaaccgtgtcccaattgaagatcgaggacaccacccaacgg
acggagatcgttgatcgcattgcgaatgtcttagcggaactcaatcgggaacggtccctg
ctgcgagcccaattacgtgaagtgatccatcgagagctggaatccgattacgcatcgcaa
tcgaagcttctcgatcaatccatggcgggtgctttggagagcgccgacgagccggacaag
gtagacactgcattgacgcggctcctcgttcaagtcgaggaactggaaggtcgctatgcc
gaatccgacgatttgctgttgaggctcacggagaagcggcaggtgatagccgatgccttc
gaagcaagacgtgtacagctcgtcgaagcgcgaacgcagcgagccaattctctggtgctc
gcggccgatcgattgctggctggtattgcagccaaggcgaatcgaatcgaagagcccaat
gcgttgcgagcctacttcgcctccgacatgatggtcgaaaaggtgagagggatcacggag
cagttacagaagcttggcgattcggtacgccaagacgacgtgttgtcccgtctcaaatcg
attggagacgatgcgctgcggcagcagcgagatcggcgagagctcctcaccgatggcaat
cgtgtgatcaagcttggtcagcacgcattcagtgtcaatcatcaagcgatcgagcttacg
accgtcgcgcgcggtggatgtctgcagttgcatatcaccggaacgcaatacttcgagcca
ctcgatgcaccggagctggagcaagccaaagatttgtgggaggtcgcttttccgagcgaa
acacccgaagtgtaccgcggtgagacgctcgcctattggatgtcgacgcgtgtggatgcg
gagcgttttctcgccagttcgcaagaatttcggatccaaaccattcgcgatttcatgcag
accaggtatcaggacgggtacgcgcgcggcgttcacgatcaggatgccgaaaggattctt
accgaactcctgcggacgcaacagaatctaggattgttaacgacttctcccaagactcga
gccttcgccatgttggtgtggagtgtcctggtcccgaccaaggagagggaggcgacccag
cagtgggtgatcgcctcggagtcgattgacaagctggttggtgtgaatcaaccttcgacc
gcggtgcgcgcgcatgtaaggcaattgatggaatcgcatggtcgcgagattgcggaaagc
gattccacattggatgatcgcaccctcgacaatgcggccaactttctggtcgataccatg
cggcatccttccggcgcgtttcccgaatccccggagagtgctgcttttcacaaagcgatg
ctgagcaatctggatgaaaagcgacttgttctgctccagcaatcgctggaatcggaggct
ttgggctggagcgaacgatgggggctcgcgaatcgactggctgttgggttttgggagtct
cggcaagcagagttgtcgggggctggtatcgacaaagcgtatgcaccggaagtcgcatgg
cggctcctcgctgcggtgcagccagttgtttctactgcgaagggtacaagcaagtcatcg
gcgagccctatggctaagggggattcgaccggcgtgcaggggcagtgggccaagccagtc
aagatcgctggcttgattggcgatcaccccaagttgcagggaggtgagctcgtttttcaa
taccatgattttgcatcgagattagaacgccatatcacggagatcgtcccacgatgggaa
gcgttgcaacggacgaagcatgagttggttctccgcgctgataagcgactcaagacgcat
gacttgaaggcccgggtgctgacgagtttcgtgcgcaatcagttgatcgacacggtttat
ttgccgcgcatcggagacaatctcgccaagcaaatcggagccgcaggagacaccaagcga
acggatcgcatgggattgttgctgttgatcagtccacctggatatggcaagacgacttta
atggagtacatcgccaatcggcttgggctcgtcttcgtcaaggtcaatggtcccgcgatt
ggacacggcgtcacttccctggatccagccgaagcacccaatgcggcgtcgcgtgaggaa
gtggagcggatcaatttggcgctcgagatgggtgacaacacgatgctctatttggatgac
atccagcattgcaacgtagagttactacagaaattcatacccctttgcgatgcgacccga
cggattgaaggggtctggaaaggtagctcgaagacttacgatttacgtggtcgcaagttt
gcggtggtgatggcgggcaatccttacaacgagagtggcgagcggtttcagatcccggac
atgctcgccaaccgagccgacgtttataacttgggagagatcatcggagattctcaagaa
gcgtttgagatgtcgtacttggagaactgtctcaccagcaaccccgtattgcagccactt
tcgagagcgtccaaccaagatcagaggacgctcattcaagcggcgttgcgagggaccacc
gatgggatcgacctcgaatccaacttgtcggtcgacgatgtgcgagagatgacgagtgtg
ttgtccaaattgcaccggattcgcgatgtcgtcttgacgatgaatcgcgaatacattcga
agtgcggcacaagcagacgattatcgcacggagccacccttcaagctgcagggtagttat
cggaacatgaatcgcattgcggagaaggtcgtatcggtcatgaacgacgatgagctgaat
cgtttgatcgtgtcgagttacgagcaggacgcacaaactctctcgcgcgatggggagtcg
aatatgctcaaattcaaatcgttgttagggatactcaacgagacggagggagcgaggtgg
gcggatatatgcaaggcgttcgcgcagaagacgaagctcaaggggttgtcgggcgaccaa
gcgacggcacaggtgatcagtagtattcttggaattcagagcggattggatcacatcggt
gcagcgatcggatcggcgtcgaatctttggatggaggcggcttcgcaacgcgagcaaaag
gttgcacctgaagaggggaagccaccggagtcgcgggtggtggtacagcacgcggtgccg
cgggttatgaccgagttgattcgaagtcagttccagttgctctatgatggacttcggccg
gtgctggaggaagtcgcccagcagcggcaaagtggcgagcgattgcggcagtcgattgca
gactgtttgcggcgttacgaggagttggaagccaaagccaaagagggccccgattcgatt
gagggggaagagtag
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integrated database retrieval system