Pirellula sp. SH-Sr6A: VN12_01760
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Entry
VN12_01760 CDS
T04360
Symbol
yfhQ
Name
(GenBank) putative A/G-specific adenine glycosylase YfhQ
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VN12_01760 (yfhQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pir03400
]
VN12_01760 (yfhQ)
Enzymes [BR:
pir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
VN12_01760 (yfhQ)
DNA repair and recombination proteins [BR:
pir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VN12_01760 (yfhQ)
Prokaryotic type
VN12_01760 (yfhQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AMV30812
UniProt:
A0A142XVM4
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All DBs
Position
complement(495665..496786)
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AA seq
373 aa
AA seq
DB search
MKTWTAEELQQLRKRMKVWFSKQGRSLPWRETHDPYAIWVSEIMLQQTQVATVIPYFHRF
LDAFPTVTALADAPEERVLLHWAGLGYYRRAKQLHAASKVIRDQWEGCFPRDYDAILALP
GIGRYTAGAISSFAYDMRAPIVEANTQRLYARLLRLRGQLTERTIQNHLWKFASDILPER
SGSGRLNQAVMELGSQVCTPKAPLCHECPLQSLCPTYAHSEQSEIPSPKPSKVYEDKVEV
ALLVRDEGCRYLLRRCQAGERWAGLWDFPRFDVTSAQSEDELMTSASRQFSDRFGASVCL
SDEAMQIKHGVTRYRISLRCFHASVEGSNGNPLEPLRGEDSPDAVWCSVHRLTEVPLSST
GKRIAKHLAGLQR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttggacggctgaagagctacagcaactgcgcaagcgaatgaaagtttggttc
tcgaaacaggggcgatcgctcccctggcgggaaacgcacgacccatatgcgatttgggtg
agcgagatcatgttgcaacagacgcaagtagcgacggtgatcccctatttccatcgattc
ttagacgcctttcctacagtgactgccctggcggacgctcctgaggaacgggttctgttg
cactgggctgggttgggctactaccgacgtgcaaagcaactgcatgctgcctctaaggtc
attcgggaccaatgggaaggttgctttcctcgagactacgatgcgatcctcgcgcttccc
gggataggacgctacacggcgggagctatctcttcgttcgcgtacgatatgcgagcaccc
atcgtggaggcaaacactcaaaggctttatgcgagattgcttcggctgcgagggcagctc
acggagcgaacgattcagaaccatctctggaaatttgcgtccgacatcctgccggagcga
tctgggagcggcaggctaaaccaagcggtcatggagctcggttcgcaggtctgcacaccg
aaggccccgttatgtcacgaatgcccattgcaaagcctctgtcccacctatgcgcactcg
gagcagtccgagataccgtctccaaagccatcgaaggtttatgaagacaaagtggaagtc
gcgcttctggtccgagacgaaggttgccgttatttgctgcgacgctgtcaagcaggagag
cggtgggctggattatgggacttcccaagattcgatgtgacgagtgctcaaagcgaagac
gaactgatgacctccgcgtcccgacagttttcagaccgctttggcgcatctgtttgtttg
tccgatgaggcgatgcagatcaagcatggggtaactcgataccggatttcgctccgttgt
ttccacgcttcggtggagggctcaaacggcaatccattagagccattgcgtggagaggat
agtccggatgccgtttggtgttcggtacatcgcttgaccgaagtgcccttgagctccacg
ggaaagaggatcgccaaacacctggcggggttgcagcgatag
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