Pirellula sp. SH-Sr6A: VN12_02570
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Entry
VN12_02570 CDS
T04360
Symbol
zraR_2
Name
(GenBank) Transcriptional regulatory protein ZraR
KO
K07714
two-component system, NtrC family, response regulator AtoC
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VN12_02570 (zraR_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pir02022
]
VN12_02570 (zraR_2)
Two-component system [BR:
pir02022
]
NtrC family
AtoS-AtoC (cPHB biosynthesis)
VN12_02570 (zraR_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
PDE8A_N
AAA_16
nSTAND3
HTH_50
MerR
AAA_22
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AMV30971
LinkDB
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Position
complement(657444..658847)
Genome browser
AA seq
467 aa
AA seq
DB search
MQSETSLEKVGTRMERAGRFGVLIVDDEPNIRSGFAKGLATEADVVDTAGSAIEALEKFQ
THEHALVIVDVRLNCEMTGLELLRKIIHLRPQTAVIVITAHGTVETAVDAMRSGAFDFIL
KPVDLNLVRQQVRKARLHFELLTENALLRHQLAESGEISRIVAGGAAMEEVFRQIRQVAA
TEATVMIHGESGTGKELIARALHDLSDRSNGPFIAVNLGALPETLLESELFGHEKGAFSG
AIRQKPGCFEQAIGGTLFLDEVTEMSPKSQVDLLRVLETGEFNRIGGENRLQSDARIISA
TNRSVQDLIDDGTFREDLFYRLNIIPIEVPPLRQRREDIPLLVQHFLEHFCSRHRKDLKT
ISSEAMQILTSSPWPGNVRQLRNVIERMVIVGAGNVIDVPDLPSDLRKASRPNPTQPTSL
AEALDECEKVTIQAALEACQMHREHTAKLLGVSVRTLHYKMSRHGMH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgaaacaagcctggaaaaggttgggacgaggatggaacgagcgggacgattc
ggcgtattgattgtggatgatgaaccgaacatccgttcagggttcgccaaggggttagcg
acggaagccgacgtggtggacacagcagggagcgcgatcgaggcactggagaaattccaa
acgcacgaacatgctctcgtgatcgtcgacgtccggctgaactgtgagatgacagggctc
gagctgctccgaaaaatcattcatttgcgaccgcagacggctgtcattgtgatcactgcc
cacggaacggtcgaaaccgcagtggacgccatgcgatcgggggctttcgacttcattctg
aagcccgtcgatttgaatttggttcgtcagcaagtccgcaaagcgcgattgcactttgaa
ctccttaccgagaacgcgctgctgcgccaccaattggcggagtcgggcgaaatatctcga
atcgtcgcgggtggggcggccatggaggaggtttttcgacagattcgtcaggttgcggca
accgaagcgacggtcatgatccatggtgaaagtggaacaggcaaggagcttatcgcgcgt
gcgctccatgatctcagcgatcgaagcaacggtcctttcatcgctgtgaatctcggagca
ctccctgaaacacttctggagagtgagttgttcggccatgaaaaaggggccttcagcggg
gccatccgtcaaaaaccgggctgtttcgagcaagcgatcggggggactttgtttctcgac
gaagtcaccgagatgtcaccgaagagtcaagtcgatttgctccgcgtgctggagacaggg
gagttcaatcgcattggcggtgagaaccggttgcagtccgacgcgcgcatcatctctgct
accaatcgctccgtacaagacctcatcgatgacggaacgtttcgcgaggatctcttttat
cgattgaatatcattccgatcgaagtccctccgttgcgacagcgacgagaagacatccca
ctgctcgtgcaacattttctcgagcatttctgcagccgtcacaggaaggatctcaagacg
atctcctccgaggccatgcagatcctcacgtcgtccccgtggccagggaacgtgcgccaa
cttcgcaacgtgatcgaacggatggtcatcgtcggtgccggcaacgtgatcgatgtaccg
gacttgccctccgacttgcgcaaagcctctcgtcctaatcccacgcaacccacgtcgctc
gcggaagcattggatgaatgcgaaaaggtcacgatccaagccgctttggaagcatgccaa
atgcaccgcgagcataccgcgaagctgctaggtgtcagcgttcgcacgttgcattacaag
atgagccgacatggtatgcactaa
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