Pirellula sp. SH-Sr6A: VN12_02705
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Entry
VN12_02705 CDS
T04360
Name
(GenBank) outer membrane biogenesis protein BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_02705
Transporters [BR:
pir02000
]
Other transporters
Pores ion channels [TC:
1
]
VN12_02705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
PQQ
PQQ_3
DUF6748
RhoGEF67_u1
Motif
Other DBs
NCBI-ProteinID:
AMV30998
UniProt:
A0A142XVF7
LinkDB
All DBs
Position
complement(691663..693129)
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AA seq
488 aa
AA seq
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MKRCSRRHPIHVATLLAFAILGGQRVYAQSEAQWPSFLGFGKTTAAEFATAPVTWDAKKN
VAWNTKLKGYGQSSPVVWENQVYVTCIDGPMKDQCRVHCMDLNSGETKWTHEASTKNLIP
NDDYHSRGAMTPVADGRGVVASFESGLVVALDRTGRKRWSVDLFEKYGSTETNHGISSSL
CQSDKWVFVWIQRKDDPYVVALHKDSGEEVWRTARPAGVSWGSPVMLPTEEGTLHLVMSC
SGRDGGAGFLCGLEIETGKELWRLEGLSGNSSQTPYIVSAGRVLVGASAGREGGPSKEAI
ATNGLVKIKKTPSGYVADYVWRSQRATCGFCSPTYHDGYAYFTDRRGIVTCMDIETGEVR
YSERLDQSVWATPLGIGDKLYFAGEVGTTLVLRAGPKFERLSTNVLWEDDADAQYAPPSR
PARGEANRDANRGSGTLPASSIPSASQPNPQTAIPKTKPRQYAVVFAGNKLLIRRGDQIY
AIADAANQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcgaggcgccaccctattcacgttgcaactcttcttgcgttcgcgatt
ctcgggggccaaagagtgtatgcacaatcggaagcgcaatggcctagtttcttagggttt
ggtaagacgacggccgcggaattcgcgacagctcccgttacatgggacgcaaagaagaac
gtcgcatggaatacgaagttaaagggatacggtcagagcagtcccgtcgtctgggaaaat
caggtctacgtgacatgcatcgacgggccgatgaaagatcagtgccgcgttcactgcatg
gatttgaacagcggcgagacgaagtggacgcacgaagcatcgactaagaatttaattccg
aacgatgactaccattctcgaggtgcgatgactcccgttgcggatggacgcggagtggtt
gccagctttgagtctggattggtcgtcgcactggatcgaaccggtcgaaaacgctggagc
gtcgatctgtttgaaaagtacggttcgaccgagaccaatcacggcatatcctcgtctctt
tgccaatccgacaaatgggtctttgtatggattcaacgcaaagacgatccctacgttgtg
gccctccataaagattccggcgaagaagtttggcgtaccgcgcgacccgctggcgtttcc
tggggctcgcccgtgatgttaccgacggaggaaggaacgttacatttggtaatgagctgt
tcgggccgagatggaggcgctgggtttctctgtgggctggaaatcgaaacgggaaaagag
ttgtggcggctggaggggctctccggaaattcgtcgcaaacaccttacatcgtgtcagct
gggcgagtcctcgtcggagcgagcgccgggagagaaggcggtcccagcaaagaagcgatc
gccacgaatggtctggtgaagatcaagaaaaccccatccgggtatgtagcggattacgtt
tggcgatcccaacgagcgacctgtggattttgttcgccgacgtaccacgacggatacgcg
tatttcaccgatcgtcgcgggatcgttacctgcatggacatcgaaaccggcgaggttagg
tacagcgaacgtttagatcaaagtgtttgggccactccactcggcatcggtgataagctc
tacttcgctggagaggtcgggacgacattggtgctccgcgctggtccaaagtttgaaaga
ctctcgaccaatgttttgtgggaagacgacgccgatgcacagtatgctcccccgtctcgc
ccggcccggggagaagccaaccgcgatgcaaacagggggtcagggacgctccccgcctcg
tcgattccctctgcgtctcaaccaaacccacagacggcgatccccaagacgaaaccacgg
cagtatgccgtcgtgtttgcagggaacaagttgttgatccgaagaggggatcagatctac
gcgatcgccgatgcagccaatcagtag
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