Pirellula sp. SH-Sr6A: VN12_03480
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Entry
VN12_03480 CDS
T04360
Symbol
xpsE_2
Name
(GenBank) Type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pir02044
]
VN12_03480 (xpsE_2)
02035 Bacterial motility proteins [BR:
pir02035
]
VN12_03480 (xpsE_2)
Secretion system [BR:
pir02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
VN12_03480 (xpsE_2)
Bacterial motility proteins [BR:
pir02035
]
Pilus system
Pilus assembly proteins
VN12_03480 (xpsE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
AAA_30
AAA_29
AAA_23
ATPase_2
RecA
cobW
AAA_19
AAA
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMV31153
UniProt:
A0A142XVT6
LinkDB
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Position
complement(884576..886330)
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AA seq
584 aa
AA seq
DB search
MDQPMRDFTDLLLTRGVISLEQLNEAKALAKKDDIQIAKALINLGYASSEEVTQALAEFH
KFEYIDLQSIRIPDHVIQLVPESVARENKIIPVSEEDDTIKVLVTDPFDIETIEKLRFIL
NRKVETALSPQEQIIEAINRYYGQVEGESADSMLQEFTDTQIDFTETEEDKIAAEEGDGD
ETAPVVRLVHYMISEAVQLRASDIHVEPFEDRVRIRYRIDGVLVERDSPPRRLLGALLSR
IKILAKMDIAERRRPQDGRIKITVGEKELDLRVSIIPTNHGQSAVMRLLDKDNIKVGIKQ
LGLADRDFKIFTGLIKRPNGIFLVTGPTGSGKTTSLYAALNALNRPDRKIITAEDPVEYY
LPGINQVEVRHNIGLDFARIIRAMLRQAPNIILVGEMRDTETAQMGIQASLTGHLVFSTL
HTNDAPSAVTRMTDMGVPGYMVASSVIAVMAQRLVRKICTRCRYQSGLSDAVLAEAGLPK
EIVEVAKFSKGKGCPYCQKKGYRGRIGIYEMMVVNGRIREFMFAAKSSAELRTEAILQGM
TTLYCDGLRKVINGISTLDEVYRCAKKTEQEHIAIDRVIKEFMT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaccgatgcgagactttaccgatctgctcctcactcgaggggtgatttcgctc
gagcaactcaatgaagcgaaagcgctcgccaaaaaggacgatatccagatcgccaaggct
ctcatcaacttgggatacgcctccagcgaagaggttacgcaggcgctggcggagtttcac
aagttcgaatatatcgatttgcaaagcatccggatccccgaccatgtcatccagctggtg
ccggaatcggtcgctcgggaaaacaaaattatccccgtctccgaagaagacgacacgatc
aaagttcttgtaaccgacccattcgatattgaaaccatcgaaaaacttcggtttatcctc
aaccgaaaggtcgaaacagcgctctccccgcaagaacaaatcatcgaagcgatcaaccgg
tattacgggcaggtggaaggggagtcggccgactcgatgttgcaagagtttaccgacacc
caaatcgacttcaccgaaaccgaagaagacaaaatcgcggccgaggaaggggacggagac
gagaccgctccggtcgtccggctggttcattacatgatttccgaagcggtccagcttcgt
gcatccgatatccacgtcgagccttttgaagatcgcgtccgcatccgctatcggatcgac
ggcgtgctcgtcgaacgggacagtcctccgcgaagattgctgggggctctcctctcccgc
attaagatcctcgcgaaaatggacatcgccgaacgccggcgtcctcaggacggccggatc
aaaatcacggtcggcgaaaaggaacttgatctgcgggtaagtattattccgacgaatcat
ggccagtcagcagttatgcggctactggacaaggacaatatcaaggtcgggatcaagcaa
cttgggctcgcagatcgcgatttcaaaatcttcaccggtctcatcaaacgtcctaatggt
atctttctggtcaccggtcctaccgggtccggaaagacaacctcgctctacgcggccctc
aatgctctcaatcgaccggaccggaaaatcatcacggccgaagaccccgtcgaatactac
ttgcccggtatcaatcaagtggaagttcggcacaacattggactcgacttcgcccgcatc
attcgagccatgctccgacaagctcccaatattattctcgtcggggaaatgcgagatacc
gagaccgcacagatgggaatccaagctagtcttactggacacttggtattcagtactctg
cacacgaacgatgcgcccagtgctgtgacgcgtatgaccgacatgggggtgccgggttac
atggtggccagttcggtgattgcggtgatggcgcagcggctggtgcggaaaatctgcacg
cgatgtcggtaccagtccggtttgtccgatgccgtgttggccgaggctggattgcccaag
gagatcgtggaggttgcgaaattctcgaaggggaaggggtgcccttactgccagaagaag
gggtatcgggggcgtattgggatttacgaaatgatggtcgtcaacggtcgtatccgggag
ttcatgtttgctgccaagtcgtcggcggagcttcgaacggaagcgatcctgcaggggatg
accaccctctactgcgacggattaagaaaagtgataaatggcatttcgacgctcgacgag
gtttatcgctgtgcgaagaagacggagcaggagcacatcgctattgaccgggtgatcaag
gagttcatgacctag
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