Pirellula sp. SH-Sr6A: VN12_03725
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Entry
VN12_03725 CDS
T04360
Symbol
hemB_1
Name
(GenBank) Delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00860
Porphyrin metabolism
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01120
Microbial metabolism in diverse environments
pir01240
Biosynthesis of cofactors
Module
pir_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VN12_03725 (hemB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pir04147
]
VN12_03725 (hemB_1)
Enzymes [BR:
pir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
VN12_03725 (hemB_1)
Exosome [BR:
pir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VN12_03725 (hemB_1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AMV31202
LinkDB
All DBs
Position
957107..958279
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AA seq
390 aa
AA seq
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MKVGEYDFGDSSEEIVTLYVIGVYPTKRLFTSQPSPTLSRMRRIAMTDFLNSRCENRANS
ASYPRTRLRRNRRWPWLRDMVQETSLAPSHLIWPLFVIEGDNRREPVLSMPGVERMSIDL
ATAAAAKAAELGIGAVAIFPVTPSQLKSDSGQHAVDPNNLICQATRSIASAVGERIGIVC
DVALDPYTTHGQDGIVRDGYVVNDETITVLCDQAVNQARAGATMIAPSDMMDGRIGAVRD
ALDANGYQHIPILSYAAKYASAYYGPFRDAVGSASNLGGADKKTYQMNPANSDEALREVE
LDIQEGADMIMVKPGMPYLDIVRRLHDRFPVPLAVYQVSGEYAMLKFAAQAGALDERKVV
LESMIAFRRAGASAILTYFACDVATWLNDR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgggggaatacgattttggggactcaagcgaggaaatagtcacgctctacgtt
attggagtgtaccccacaaaacgtttgtttacgagccaaccatctcccaccctttcgcgg
atgcgacgaattgccatgacggattttctcaatagccgatgcgagaatcgggcgaattcg
gcttcctatccgcgaacaaggctcaggcgaaatcgcaggtggccttggctacgggatatg
gtgcaagagacgtcgttggctccgtctcatttgatttggcctctctttgtcattgaaggt
gataatcgccgcgaaccagtcctttccatgcccggtgtcgaacggatgagtatcgacttg
gccaccgcggctgcagccaaagccgctgaacttggaatcggcgcggtcgcgatctttccg
gtcacgccgagccaactcaagtcggactcgggacagcacgcagtcgatcccaataatttg
atctgccaagccacccgcagtatcgcgtccgccgttggagaacggattggaattgtttgc
gacgttgcgctcgatccgtataccacacatggtcaagacggaattgtccgggatggatac
gtcgtgaacgatgaaaccatcacggtgctttgcgaccaagcggtgaatcaagcccgcgcg
ggtgcaaccatgattgccccttccgatatgatggatggtcgtatcggggcggtccgagat
gcactcgacgccaacgggtatcaacacattcccattctgtcttatgccgccaagtacgca
tccgcttactacggaccctttcgcgacgcagtcggttccgcgtccaatctaggtggtgcc
gacaagaagacttaccaaatgaaccccgccaactcggacgaagccttgcgagaagtcgag
ttggatatccaagaaggggcagacatgatcatggtcaaacctggcatgccctatttggat
atcgtccggcgacttcatgaccgctttccagttcccctcgcggtgtaccaagtctccggt
gaatatgcgatgctcaagttcgcggcccaagcaggtgcgctcgacgaacggaaagttgtc
ttggaaagcatgatcgcgtttcgtcgagccggagcttccgccatcctcacctacttcgcg
tgcgatgtagcgacttggttgaacgaccgatag
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