Pirellula sp. SH-Sr6A: VN12_05490
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Entry
VN12_05490 CDS
T04360
Symbol
lolD_1
Name
(GenBank) Lipoprotein-releasing system ATP-binding protein LolD
KO
K02003
putative ABC transport system ATP-binding protein
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_05490 (lolD_1)
Transporters [BR:
pir02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
VN12_05490 (lolD_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_29
nSTAND1
ATP-synt_ab
AAA_13
RsgA_GTPase
DUF87
NACHT
AAA_25
nSTAND_NTPase5
nSTAND3
AAA_22
Mg_chelatase
Herpes_LP
LIP1
FtsK_SpoIIIE
DUF6079_1st
AAA_28
AAA_23
MMR_HSR1
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AMV31551
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Position
1349071..1349847
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AA seq
258 aa
AA seq
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MNDSSTVLQVSSLTKTYKQGDRDVRALSDLHLTVNRGESVAIMGASGSGKSTLLHLIAGL
TRPDSGEVVIDGQSVFSLSDSQLTKFRRDRIGLVFQSFNLVPALTAEDNILLPLLSGGKR
CDSSQLEELLDHLGIEHRRFHRPDALSGGEQQRVAIARALITQPAIVLADEPTGSLDSQN
SQAICELLHKISEKERRTIVTVTHEPSVAIYSNVVVVLKDGKVVSKFETGQFADSVGLAA
HYLEVVSGQTGELEHTTT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacagctcaactgtcttacaggtcagtagtcttaccaagacttacaagcaaggg
gatcgagatgtacgagccctttccgacctgcacctaaccgtaaaccgaggtgaatcggta
gccattatgggagccagcggttctggaaaaagcacgttgctccacctgatcgccggcctg
actcgcccagacagcggtgaagtcgtaatcgacgggcaatccgtcttctcgctctcggat
agccagctcaccaaatttcgacgcgatcgaattggtctagtgtttcaatccttcaatctc
gtcccggcattgactgctgaggacaatattttacttccgctgctttctgggggcaaacgc
tgcgattcatcgcagttagaagaattgcttgatcacttggggattgaacatcgccgtttt
catcgtccagatgctctaagcggtggtgaacaacaacgagtcgcgattgcacgcgcgctg
ataacgcaacctgcgatcgtccttgcggatgagccaacaggaagtctcgactcgcagaat
agccaagcaatctgcgaattgttgcataaaatatctgaaaaggaacgtcgaacgattgtt
acagtgacccatgaacccagcgtggccatctattcaaatgttgtggtggtgctgaaagat
ggcaaagtggtttcgaaattcgagactggccaatttgctgactctgtagggttggcggca
cactatctagaggtcgtttctggtcaaacaggtgaattggagcacaccacaacgtaa
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