KEGG   Pirellula sp. SH-Sr6A: VN12_07255
Entry
VN12_07255        CDS       T04360                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir00230  Purine metabolism
pir00240  Pyrimidine metabolism
pir01100  Metabolic pathways
pir01232  Nucleotide metabolism
Module
pir_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:pir00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    VN12_07255 (nrdJ)
   00240 Pyrimidine metabolism
    VN12_07255 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pir03400]
    VN12_07255 (nrdJ)
Enzymes [BR:pir01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     VN12_07255 (nrdJ)
DNA repair and recombination proteins [BR:pir03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    VN12_07255 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N
Other DBs
NCBI-ProteinID: AMV31901
UniProt: A0A142XYA1
LinkDB
Position
complement(1726530..1729502)
AA seq 990 aa
MAIVEMGRDSKKRSRTTHEARGDRGGLKIESRFCPNDVADPFDTVQWELRSAAIKDESGK
ALFEQKNCEVPSDWSQLATNVVVSKYFYGDHNNPNERESSVRQLIHRVTRTMADWGIADG
YFDTPEDGERFYRDLTWLCLHQYGSFNSPVWFNVGLYQQYNVTGAKCNWHYNVTTGQVEQ
PENPYEYPQGSACFIQSVEDNMEDIMRLATSEAMLFKFGSGTGTDLSTIRSSREKLSGGG
KPSGPLSFMRVYDQIAAVVKSGGKTRRAAKMQSIKVWHPDVMEFIECKWKEEQKAHALIR
QGYESNFNGEAYSSVMFQNANLSVRVTDEFMSAVADNKAWKTRWVSDKCEAEPPTYQARD
ILNRMSECAWHCGDPGVQYDTTINKWHTCPNSGRINASNPCSEYMFLDNTACNLASINLM
KFRRDDGTFDHDGFTNACRVFFIAQEILVDHASYPTDRIAFNSHLFRPLGLGYSNLGSLI
MTSGIPYDSPEAHGMCGAITALLHGAANLTSSEIAGVVGTFTEYDENAEPMMRVMQMHRN
AVEQIDSAGPAYLKDAARSVWEKVLESGHRNGFRNAQATVLAPTGTISFMMDCDTTGIEP
DIALVKYKQLAGGGMLKILNKSVHMGLRTLGYTEDQIKSIEAYINDKDTIEGAPELKTEH
LPVFDCAFTPANGTRSIRWQAHVEMMAAAQPFLSGAISKTVNMPKESTVEDIGNAYFWGW
ELGLKAIAIYRDGSKQSQPLSTKSEGKKAEEAAAKTVEKIVYKPRRERLPDTRNSVTHKF
SIAGHEGYISVGLYPDGRPGEVFITMAKEGSTVGGLMDSFGTATSIALQYGVPLEVLVNK
FSHTRFEPMGHTTNPDIRIAKSLIDYIFRWLGLTFLDSYREEHKMKTEMASPSAATVALT
STKTPVNGNGAEVPSPVASYTKARFVGFDSIPVRGNGSEGSGSGQIAESRDSQFAGFQGD
APSCDNCGAITVRAGNCYLCHNCGNSLGCS
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggcaattgtagagatgggccgcgatagcaagaaaaggtctcggacgacgcatgaggca
cgcggcgatcgaggtgggttgaagatcgaatcccgattctgtccaaacgacgtcgcggat
ccattcgacaccgtgcaatgggaattgcgcagtgcggcaatcaaagatgagtctgggaaa
gcgttgttcgaacagaagaactgcgaagtcccatccgactggagtcagctagcgaccaac
gtcgtggtgagcaagtatttctacggcgaccacaataatcccaacgagcgagagtcatcg
gttcgccagttgatccatcgcgttacgcgcacaatggccgattggggaatcgccgatggt
tacttcgacaccccggaggatggagagcgattctaccgtgacttgacctggctttgcctt
catcaatacggatcgttcaactcccccgtttggttcaacgtcggactttatcagcaatac
aacgtcacgggcgcgaagtgcaattggcactacaacgtcacgaccggccaagtcgagcag
ccagaaaatccttacgagtatccccaagggtccgcatgctttattcaaagcgtcgaggac
aacatggaggacatcatgcgcttggcgacgagcgaggcgatgttgttcaagttcggatcg
ggaacgggaaccgatctgtcaaccatccgcagcagccgtgagaagctatctggaggaggg
aagccaagcggtcccctctcgttcatgcgtgtctacgatcagatcgctgcggtcgtgaag
tcgggtggaaagactcgccgcgccgccaagatgcaatcgatcaaagtctggcacccggat
gtcatggagtttatcgagtgcaagtggaaggaagagcaaaaggcgcatgcgctcattcgc
caaggctacgagtcgaacttcaacggcgaagcctattcgtccgtcatgttccaaaacgcg
aacttgtccgttcgtgtcaccgatgaattcatgtccgccgttgccgataacaaggcttgg
aagacccgttgggtgagcgacaagtgcgaagcggagccaccgacctaccaagctcgcgat
atcctgaatcgcatgtccgagtgcgcatggcactgcggtgacccaggggtacagtacgac
acaacgatcaacaagtggcatacgtgcccgaacagcggccggatcaacgccagcaacccg
tgctcggagtacatgttccttgataacacggcttgcaatctcgcctcgatcaacttgatg
aagttccgacgagacgatggtacgttcgatcacgatggattcacgaatgcgtgccgcgtg
ttcttcatcgcccaagagatcttggtcgatcatgcgagctaccccaccgatcgcatcgcc
ttcaatagccacttgttccgtcctctggggctgggctactcgaacttgggctccctcatc
atgacgtcgggaattccttacgattccccagaggcccacggcatgtgcggtgcgatcact
gcgttgctgcacggcgccgcgaacttgaccagctcggaaatcgcaggtgtcgtcgggacg
ttcacggaatacgacgagaatgccgagccgatgatgcgagtcatgcaaatgcaccgaaac
gctgtcgagcaaatcgattccgcgggccctgcttatctgaaggacgccgcacgctcggtc
tgggagaaagttctggagtcggggcatcgcaatggattccgcaacgcgcaagcgacggta
ttggcacccacgggcaccatcagttttatgatggattgcgatacgacgggcatcgaaccc
gatattgcgctggtgaaatacaagcagctggcgggtggcggtatgctgaagattttgaac
aagtcggtgcacatggggttgaggacactcggctacaccgaagatcagatcaagtcgatt
gaggcttatatcaacgacaaggatacgatcgaaggggcaccggaattgaagaccgagcac
ttgcccgtgttcgattgtgccttcactcctgcaaacggcacccgcagcattcgctggcaa
gcccacgtggagatgatggccgccgcgcaaccgttcttgtccggtgcgatcagcaaaacg
gtgaatatgcctaaggagagcacggtcgaagacatcggtaacgcttacttctggggttgg
gaattggggctcaaggcgattgcgatctatcgagatggatccaagcaaagtcagccgctt
tcgaccaagtcggaagggaagaaagcagaagaagcggccgcaaagacggtcgagaagatc
gtttacaaaccgcgccgcgaacgattgcccgacactcgcaactcggtcacccacaagttc
agcatcgctggtcatgaaggctatatcagcgtcggtctgtatccagatggacgtccaggc
gaagtcttcattacgatggcgaaggaagggagcacggtcggcggtttgatggacagcttc
ggcaccgcaacgtcgatcgcattgcaatacggtgttccactcgaggtcctagtgaataag
ttcagtcacactcgcttcgaaccgatgggccatacaaccaatcctgatatccgtatcgcc
aagagcttgatcgattacatcttccgttggctcggcttgaccttcctcgatagctatcga
gaagagcacaagatgaagacggagatggcatctccctcggcagcgaccgtagcattgacg
tcgaccaagacgccggtaaatggaaatggagccgaagttccttcaccagttgcctcgtac
accaaggctcgattcgtcggtttcgatagtattcctgtccgtggcaacggatcggaaggt
tcgggttcaggtcagatagccgagagccgggactcgcagtttgctggattccaaggagac
gcaccaagctgtgataactgcggtgcgatcacggttcgagctggaaactgctacctctgc
cacaactgcggcaacagcctaggctgcagctag

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