Pirellula sp. SH-Sr6A: VN12_09070
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Entry
VN12_09070 CDS
T04360
Symbol
ribBA
Name
(GenBank) Riboflavin biosynthesis protein RibBA
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00740
Riboflavin metabolism
pir00790
Folate biosynthesis
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
VN12_09070 (ribBA)
00790 Folate biosynthesis
VN12_09070 (ribBA)
Enzymes [BR:
pir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
VN12_09070 (ribBA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
VN12_09070 (ribBA)
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Gene cluster
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
MGS
Motif
Other DBs
NCBI-ProteinID:
AMV32261
UniProt:
A0A142XZB1
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All DBs
Position
2175225..2176436
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AA seq
403 aa
AA seq
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MTNTKFSSIEKAVAAIARGEVVIVLDDEDRENEGDFVCAAESVTTETINFMLQGHGQLCA
PVLPSVCQRLELRPLVDHNTSPLTTAFMTPVDHAGCKTGITAGERAETIRRLASESSKPS
DFVKPGHVYPLLAMEGGVLRRAGHTEAAVDLARMAGLTPAGVLCEILNHEGDRATRDELL
DLAEKYGLEIITVEQIISHRRISEKLVNRTAKAKLPTRYGLFDIIVYGVQFESQEPVALV
MGDLSVPGEKAPLVRMHSSCFTGDLVASLRCDCGDQLQQALEAIAREGRGVLVYLPQEGR
GIGLAQKIKAYALQEEGLDTVEANHKLGFKADMRDYGIGIQILKDLGLHEIRLLTNNPKK
KEAFNLRGFDLSVVDQVPIIPEINEHNAAYLATKRDKMGHKLP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacaaagttcagcagtatcgaaaaggccgtcgcagcgatcgcccgaggagag
gtggtgatcgtactcgacgatgaagatcgtgagaacgaaggtgattttgtttgtgctgca
gaatcagtcacgaccgagaccatcaattttatgctccaaggccacggacaactctgtgca
ccggtgttgccttcggtctgccagcgactggaacttcgtcccctggtagatcacaacacc
tccccactgacaaccgcctttatgacgcccgttgatcatgcgggctgcaaaacgggtatc
actgccggggagcgagctgaaaccattcgaagacttgccagcgagagttcgaagccttcc
gatttcgtaaaacccggacacgtttatccactcctggcaatggaaggtggcgtattgcga
cgagccggtcatacggaggcagcagtggatctggcgcgcatggcaggcttaacgccggcg
ggggtattgtgcgagattttgaatcacgaaggggatagagcgacgcgagatgagctgttg
gacctcgccgagaagtacgggttggaaatcatcaccgtggagcagattatctcgcatcga
cgtatcagcgagaaattggtgaacaggacggccaaggccaaattgcctactcgctacgga
ctgttcgacatcatcgtctacggggtgcagtttgaatcgcaggaaccggtggcgctcgtg
atgggtgatctcagcgtccccggggaaaaagcacccttggtccggatgcatagcagttgc
ttcaccggcgatctggtcgcgtccctccgatgcgactgcggcgatcaactccaacaagcg
ttggaagcgatcgcgcgcgaggggcgaggtgttttggtctatttgccacaagaaggacgg
ggtattggtcttgctcaaaaaatcaaagcctatgcgctccaagaagaaggcttggatacc
gtcgaagccaatcacaaacttggcttcaaagcagacatgcgggattacggtattggcatc
caaattctgaaggatctcggattgcacgaaattcggctcctcaccaataatcccaagaaa
aaggaagccttcaacctgcgtggatttgacctttcggttgtcgatcaagtgccgattatt
ccggagatcaatgagcataacgccgcttacctcgcgaccaagcgcgacaagatgggtcac
aagcttccttga
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