Pirellula sp. SH-Sr6A: VN12_09080
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Entry
VN12_09080 CDS
T04360
Symbol
smc_1
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pir03036
]
VN12_09080 (smc_1)
Chromosome and associated proteins [BR:
pir03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
VN12_09080 (smc_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
AAA_23
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMV32263
UniProt:
A0A142XZ23
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Position
2178633..2182358
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AA seq
1241 aa
AA seq
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MLKALELVGFKSFADKTRFEFPDGITVVVGPNGSGKSNVVDAVKWVLGAQSAKALRGADM
ADVIFKGSAEGGRKPANSAEVVLVLDNTSRIFHHDSEEVHVSRRVFRSGEGEYAINGQPC
RLKDVKDLFRGTGVGVDAYSLIEQGKVDRLLQASAKDRRGIFEEAAGISRFKAKKVEAER
RMQRVDQNLVRLGDIVDEVGKRLQTLKSQATKAQRYREITHQLTTQRWNLGWIESRLLEH
QRNALEIQRTEAITSKEECLVKWKELEESAAREKNLLDALQSELVSFQNAYLNAEKEAIA
AESGYKTAIARSEELEIERSLIQERLIALQERASSSVEETQTRQREIESIQQEQIDAIQL
LSNREADLDEVRRELEQLNQSIDSDTATYNETQTTIHTLRSKIVSFQYHIEQLQNSIETW
RGQESQLRLEWERQEKESTQLSQEIEQARVRAATAREGRSQAEQSLEQGRKKLFENQEQL
AAMQGKLHGVRERLSVLAQLEDQFAGDGRGGQQLLRLARANQDLDLKDGESSVSMMSNPW
HSVRGLVADILSSEMHLAPLIDVALGHLADAIVLSNGQIVDWIHEGALSVDGRVTLLRLD
RLPNRRTGEKIQLDGLRGIIGRADRLTQYAPEYEPLIRALLGTTWFVDSLATALELSHFR
GAGLRFVTAECQLVDSDGSITIGSLQAGLGLISRRTEMQMAREEILHLESELEQATQAMV
NLQESLAREEQALKQLAGQEREASQELSRVEVLSESNQERRSNLLKRIDEILSQIANGDE
RILDAENQSQEADAECQHSELAREEIDVRLHSWREKRTELQSKLKLQESLANEQKIQVAR
LEQRLDGLKLTLDQLVLDASEREKNVSQASLSLAQIDQRIQESKQHAARCLEAMGELRAT
ATNLEAQRIAQLAKIDEQNNAAGQASRQFEQMRRQLDKNEDKLAQITQNLQQIDSQVAQL
REHYAAEYQIHLPQDLLELELHTEDERLSEETAAQLQSIAAVSNTHELQQLKQKTESEIA
WLRSEIASTGSVNMEALAELDALQSRYDRLAGHQSDLIEAKNGLLRTMTKIDEDSRHLFV
ETLQAIRKNFQDLYRRSFGGGFADILLENENDPDSGIEIIATPPGKTTLSNSLLSGGEKA
LTAVALIMAFFQYRPSPFCILDEVDAPFDEANIGRFVTVLREFLSTTKFIVVTHSKKTMT
AANMIYGVTMQESGVSRQVSVRFEEVNEKGEILTKDRKLAA
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagccctcgaactggtaggcttcaagagttttgccgacaaaacgcggttcgag
ttccccgacgggatcaccgtagtcgtcggtccgaacggatctggaaaatccaacgtcgtc
gatgcagtaaagtgggtgctcggtgcccagagcgccaaagcgctccgtggtgcagacatg
gcggatgtgatctttaaaggttccgcggaggggggacgcaaaccggcgaacagcgccgag
gtcgtgcttgttctcgacaatacgtctcgcatctttcatcacgactccgaagaagtgcat
gtgagccgaagggtttttcgcagcggcgaaggggagtacgcgatcaacggccagccttgt
cggctgaaagatgtcaaagatctctttcggggcactggtgtcggcgtcgatgcttacagt
ctcatcgaacaggggaaggttgatcgcctgctgcaagcctccgcgaaagatcgacgcgga
attttcgaagaggctgccggcatttctcggttcaaagccaaaaaggtggaagccgaacgt
cgaatgcaacgcgtcgatcaaaacctggttcggctgggggacatcgtcgacgaagttgga
aagcgattgcaaaccctcaagagccaggcgaccaaggcgcagcggtatcgagaaatcacc
catcaacttacaacacaacgatggaatcttggttggatcgagtctcgcctgctggaacac
caacgcaacgctctggaaattcaacggacggaggcgatcacctccaaagaagaatgtttg
gtgaaatggaaagagctggaagagtctgcagctcgagagaaaaacctactggatgcactg
cagtcggagcttgtctcctttcagaatgcgtatctaaacgcagaaaaagaagcgatcgca
gcggaaagcggatacaaaacagccatcgcccgctcggaagagttggagatcgaacgatcg
ctcattcaagaacgtttgatcgcattgcaagagcgagcttcctcgtccgtagaagaaacc
caaacgcgacaacgcgaaatcgagtcgatccaacaagaacagatagacgcaattcagctg
ctttcgaatcgtgaagcggatctggatgaagttcgccgcgagctcgagcagttgaaccaa
tcgatcgactccgatacggccacgtataacgagacgcaaacgaccattcacacgttgcgt
tccaaaatcgtcagttttcagtaccacatcgagcagctgcaaaactcgatcgaaacctgg
cgaggtcaggagtcgcagttacgattggaatgggaacgtcaagaaaaggaatccactcaa
ctatcgcaagagatagaacaggccagggtgcgagcggcgacggctagagaggggcgatcc
caagcagaacaatcgctcgaacaagggcggaagaagctgttcgaaaatcaagaacaactc
gccgcgatgcaaggcaaattgcacggggtacgagaacgattgtcggttcttgcgcaattg
gaagaccaattcgcaggagatggccggggtggacaacaattgttgcgactcgcacgtgcg
aaccaagacctcgacttgaaagatggtgagtctagcgtctcgatgatgtcgaacccgtgg
cattcggtgcggggacttgttgcggatattctttcgagcgaaatgcacctggcccccttg
atcgacgtggcgctcgggcacctcgcggatgcgatcgttttgagcaacggtcaaattgtc
gactggatccatgaaggcgccctctccgtcgatggccgcgtgaccttgctccgactggat
cgtctccccaaccgacgaacaggggagaagatacagctcgatggactgcgaggaatcatc
gggcgagctgatcggctaacccagtatgctcccgagtacgaaccgctcatccgagctttg
ctcggaacgacatggttcgtggattctttggcgaccgccttggaactcagccactttcgc
ggagccggattgcgattcgtgaccgcggaatgccaattggtcgattcggatggaagcatt
acgatcgggtcgttgcaagcgggcttaggattgatctcccgacggacagaaatgcagatg
gcgcgcgaagagatcctgcatctcgaatcggagctcgagcaagcgactcaggcgatggta
aaccttcaagaaagcttggctcgcgaagaacaagccttgaagcaattagcggggcaagag
agggaggcttcgcaagagctttcgcgtgtcgaagttctgtcggagtccaatcaagagcga
cgatcgaaccttctgaaaagaatcgacgagatcctatctcagatcgcaaacggtgatgaa
cgcattctcgatgcagagaaccagtctcaggaggcggatgcagaatgccaacacagcgaa
ttggcacgcgaagagatcgatgttcgtctgcactcatggagggagaagagaacggagctt
cagtccaaactaaagcttcaagagtcgctagcgaatgaacaaaagatccaagtggctcga
ttggaacaaaggctcgacggattgaagctcacgctggatcaactcgtattggacgcatcg
gagagagaaaagaatgtgagccaggccagcctgtccctcgcgcaaatcgaccagcgtatc
caagaatccaaacagcatgccgcccgctgcctggaggcgatgggcgaactgcgagcgacc
gccaccaacctagaagcccagcgcattgcgcagctggcgaagatcgacgaacagaacaat
gcggccggacaagcttcacgccagtttgagcaaatgcgacgtcaactggataagaatgaa
gacaagttagcacagatcacccaaaacttgcagcaaatcgactcccaagttgcacagctt
cgcgagcactacgccgcagaatatcaaatccacttgcctcaggatttgctggaactcgag
ctgcataccgaagacgaacgtctttctgaagaaacggctgcacaactccaatcgatcgct
gcagtctccaatacgcatgagttgcaacaactcaaacagaaaacggaatcggaaattgca
tggctccgatccgaaatcgcgtcgaccgggagtgtcaacatggaggcgctcgcagagctc
gatgcattgcaatcgaggtacgatcgcctcgccggtcaccaaagcgacttgatcgaagcg
aagaatggattgctgcggactatgacgaaaatcgacgaagattctcgtcacttgttcgtc
gagacgctgcaagcgattcgcaaaaatttccaagacctgtatcggcgttctttcggcggt
ggcttcgccgacattcttctggaaaacgaaaacgatccggatagcggtatcgagatcatt
gcaacgcccccgggcaagacgacgcttagcaattcgcttctgagcggtggcgaaaaagct
ctcacagcagtcgcattgatcatggcattctttcaatatcgtccgagcccgttttgtatt
ctcgatgaagtcgatgcgcctttcgacgaagccaatattggtcgttttgtgacggttctc
agagagtttctctcgactaccaagttcatcgtcgtgacgcatagcaagaaaacaatgacg
gcagccaacatgatctatggtgttaccatgcaggaaagcggggtttcgcgacaggtctcc
gttcgcttcgaagaagtcaacgagaaaggggagatcctcaccaaagaccgaaagctcgct
gcttag
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