Pirellula sp. SH-Sr6A: VN12_11310
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Entry
VN12_11310 CDS
T04360
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00220
Arginine biosynthesis
pir00240
Pyrimidine metabolism
pir00250
Alanine, aspartate and glutamate metabolism
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VN12_11310 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VN12_11310 (carB)
00220 Arginine biosynthesis
VN12_11310 (carB)
Enzymes [BR:
pir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VN12_11310 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
RimK
Sacchrp_dh_C
B12-binding
TIMELESS_C
Motif
Other DBs
NCBI-ProteinID:
AMV32703
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Position
2737772..2741017
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AA seq
1081 aa
AA seq
DB search
MPKRTDIKKILLIGSGPIVIGQACEFDYSGTQACKALREEGFEVVLVNSNPATIMTDPAT
AERTYIEPLTWEIVEKVIERERPDAILPTLGGQTALNIAMDLAREGVLEKNNCEMIGANP
EVIHKAEARDAFKLAMEKIGQEVCKGSVVHSLDEARKVLQEVGLPCVVRPSFTMGGSGSA
IAYNRDDFEGLVQNGLTLSPITEVLIEESIIGWKEYEMEVMRDVDDNVVIICSIENFDPM
GVHTGDSITVAPAQTLTDKEYQRMRDASLAIIREIGVETGGSNIQFAIHPTNGRMIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFRLWELQNDITRKTQACFEPTIDYVVTKIPR
FAFEKFPEADSTLTTQMKSVGETMAIGRTFKESFQKALRGLEVGAFGFGSDSKDLWYTDR
RPDDEEINNKLSKPNADRVWYLRYALLSGMSIDEIHNITAIDRWFLDQLSEIVEMEKYLR
TLGSAGAVDRPTLRQAKQMGFSDRQLAHILGSDEMEIRDWRKSQGIVATFKSVDTCAAEF
EAYTPYYYSSYEEENEAPSKGDKKRVMILGGGPNRIGQGIEFDYCCCHASYALRELGIES
IMVNSNPETVSTDYDTSDLLFFEPLTTEDVLNIYDTVQPDGVIVQFGGQTPLNLARALAD
AGVPIVGTSVETIEDAEDREKFQALLHELKLKQPANGIARTMLQARSEVQKIGFPCLVRP
SFVLGGRAMEICYDYSQFDRFIAEAFVVAQGQPVLIDRFLEDATEVDVDAVSDGEDVVIM
GVMEHIEEAGVHSGDSACVIPPFSLSKAVLDEIRHATVAMAKRLRVIGLMNVQFAIKEEE
GRPVVYVLEVNPRASRTVPFVAKATGTPVANIAAKVMVGCKLKDLGITSEPIPRSVSVKE
SVFPFRKFAGVDIVLGPEMRSTGEVMGVSDDFALAFNKSQIAAGVVLPKSGNVFLSISSR
HRAGIIDMARQLHEMGYKLLATSGTAAELQRGHIPVVPIKKLAEGNPNLIDYLKNGEVSL
ILNTPSGKGARTDEGRIRAAAVQFGVPCITTVAAGRIAIEAMSVMREKPMTVLSLQERFS
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaaacggactgacatcaagaaaatccttctcatcggttccggccctatcgtcatc
gggcaggcgtgcgaattcgattactctggcacacaggcttgcaaagccttgcgcgaagag
gggttcgaagtcgtcctcgtgaacagcaatcccgccacgatcatgaccgatccggcgacg
gcggagcggacctatatcgagccgttgacttgggaaatcgtcgaaaaagtcatcgaacga
gagcgtcccgacgccattctcccgacattgggaggtcaaacggcattgaatatcgccatg
gatttggcccgcgagggagtactcgagaagaacaactgcgaaatgatcggggccaaccct
gaggtcattcacaaggccgaggcccgcgatgcattcaaattggcgatggaaaagatcggc
caagaagtctgcaaaggttccgtggttcattcgctcgatgaagcccgcaaagtgcttcaa
gaagtgggtctcccctgcgtggtacgccccagttttaccatggggggaagcgggtcggcg
atcgcttacaaccgtgacgacttcgaaggcctcgtccaaaacggcttgaccctttcaccg
atcaccgaagttctcatcgaagagtcgatcatcggttggaaagaatatgaaatggaagtc
atgcgcgatgtcgacgacaacgttgtcatcatttgttccatcgagaacttcgatcccatg
ggggtccacaccggcgattcgatcaccgtcgcgccggctcagacgttgaccgataaagag
taccagcggatgcgcgatgccagtctcgccatcatccgcgagatcggcgtggagacagga
gggtccaatattcagttcgccatccatcccacgaatgggaggatgattgtcattgagatg
aatcctcgcgtcagccgttccagcgccctggccagcaaggcaacggggttccccatcgcg
aagattgcagccaagctggctgtcggcttccgattgtgggagcttcaaaacgacatcacc
cgtaagacgcaagcttgcttcgaaccgaccatcgattatgtcgtgaccaagatacctcgc
tttgcttttgaaaagttccccgaggccgactccaccctgaccacgcaaatgaagagcgtt
ggcgagacgatggcgatcgggcgcacgttcaaagagtccttccaaaaagcattgcgaggg
ctcgaagtgggagcgttcggatttggatccgacagcaaagacctttggtataccgatcga
cgaccagacgacgaagagatcaataacaagctttcgaaacccaatgccgaccgcgtttgg
tatctacgctatgccttgctcagcggaatgtcgatcgatgaaatccataacatcaccgcg
atcgatagatggttcttggaccagctctcggagattgtggagatggagaagtatctccgt
acgctagggagcgccggggccgtggaccgccccacgctaaggcaggcgaaacaaatggga
ttctccgatcgacagcttgcccatattctcggcagcgacgagatggagattcgagattgg
agaaaatcgcaggggatcgtcgccaccttcaaatcggtcgacacctgtgctgcggaattc
gaggcatacaccccttattattacagctcgtacgaagaagaaaacgaggcaccgtccaag
ggggacaagaagcgcgtgatgattctcggcggtggccccaatcggattggtcaagggatc
gagttcgattactgctgctgccatgccagctacgcccttcgcgagttgggaatcgagtcg
atcatggtcaacagcaatcccgagaccgtgagcaccgattacgacaccagcgatttgctc
ttctttgagcctctaacaaccgaagatgtgctcaacatctatgacacggttcaacccgac
ggtgtcatcgtgcagttcggtggacagactccgttgaatttagccagggcgctcgccgat
gcaggggttcccatcgtgggtaccagtgtcgagactatcgaagacgcagaggatcgcgag
aagtttcaagcgttgctgcatgagctcaaactcaagcagccagcgaacggcattgcgcgc
acgatgctgcaggcgcgttcagaggttcagaagatcggcttcccatgcttggtccgcccc
agcttcgtgctcggtggtcgtgctatggagatttgctacgactactcgcaattcgatcga
ttcattgccgaagcgtttgtcgttgcccagggacaaccggtcttgatcgaccgattcctc
gaggatgcaaccgaggtcgacgtggacgccgtctcggatggcgaagacgtcgtcatcatg
ggagtcatggagcacatcgaggaggcgggtgttcactccggagattccgcgtgcgtgatc
ccacccttctcgctgagcaaagcggtactcgacgaaatccggcatgcgaccgtcgccatg
gcgaagcgtttgcgggtcatcggactgatgaacgtccagtttgcgatcaaggaagaagaa
ggacgcccggttgtttatgtattagaggtcaatccgcgagctagtcgaaccgttccgttt
gtcgccaaagcgacaggaactccggtcgccaacatcgccgccaaagtgatggtgggttgc
aaactgaaggatttgggaatcacttccgagcccattcctcgcagcgtttcggtcaaggaa
tcggtcttccccttccgaaagtttgctggagtcgacatcgttttaggaccggagatgcgc
agcaccggcgaagtcatgggggtcagcgacgattttgctttggccttcaacaagagccaa
atcgctgccggcgttgtccttcccaaatcggggaatgttttcctaagcatctcctcgcga
catcgggctggcattattgatatggcccgccaactgcatgagatgggatacaaacttttg
gctacctccggaaccgcagcggagctccagcgaggccacattcccgttgtcccgatcaag
aagttggcggagggtaatcctaacctcatcgattacttgaagaatggagaggtgtccctc
attctcaataccccgagcggcaaaggggcgcgaaccgacgaaggtcgcatccgagccgcc
gcggtccagtttggagtcccctgtattaccacggtggcggcagggcggattgccatcgaa
gcgatgtccgtgatgcgtgagaagcccatgaccgtcctttcgcttcaagaacgattctct
agctag
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