Pirellula sp. SH-Sr6A: VN12_11380
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Entry
VN12_11380 CDS
T04360
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pir03032
]
VN12_11380 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
pir03400
]
VN12_11380 (gyrA_1)
Enzymes [BR:
pir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VN12_11380 (gyrA_1)
DNA replication proteins [BR:
pir03032
]
Prokaryotic type
DNA Topoisomerases
VN12_11380 (gyrA_1)
DNA repair and recombination proteins [BR:
pir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VN12_11380 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LpxI_C
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
AMV32717
UniProt:
A0A142Y0E8
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All DBs
Position
2752301..2754793
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AA seq
830 aa
AA seq
DB search
MAKRGTSGVPDGRGQDDENQEASPVKKTRRKGGAEPNLFDELSEDGVQPIALKDAAQARY
LNYSLSVITSRALPDVRDGLKPVQRRILYQMDQEGMRFGTKHRKCAKVVGEVMGNFHPHG
DSAIYDALVRMAQSFSLRVPLVDGSGNFGSIDGDNAAAMRYTECRMSAIASELLADLGNG
TVPFKPNYDGSRLEPVVLPSRVPNLLLNGATGIAVGMATNIPPHNLGEICRALLKLLADP
EIKDYQLVANDAVQGPDFPTGGIVINTKEELREIYRTGQGSIRLRGKTESGGESKGSKLL
HITAIPYGVNKSVLVERIADIVLSGKMPLIEDVRDVSTRDIRIDLQLRKDADEQKVLAYL
YKHTPLQTNFAVNMTCLIPTENPELGAPNRLGLKEILWFFLRFRLEVVTKRLENELAALL
KRMHILEGFVLIFDALDEIIRIIRKSEGKADAAEKIMARFPAAKGGLDADQTDAILELKL
YRLARLEINLIQDELKDKQKRAKEIQRLLKEKTDDTNNSGRWGIVRQEIESLIGDYGKLK
ENLRKTELLTVDAEPEYNEEDFIVAEDCHVLLTRDGWVKRQKSIADPSKSRLREGDSVLA
IVAGSTRSTVAFFSSFGVCYTTRFIDIPASTGHGEPVQKLFKMKDGEKIVSVLSLDPRAI
GNIAEDPKHPDYCPEVHGFAATSSGFALRFGLQQFVEPSTRSGRRFARVAPEHGVIGVEA
THGTETVLAISEECRAMVCSSEEVNYLSGAGKGVMLVKLSKTDRLLGFKLSTADRDLLVV
ETNRGAQKTISTAKYNTTSRGGRGIEIQKNGKISSIVVAPITSAPTLENS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgcggtacttcgggcgttcccgacggcaggggtcaggacgacgagaaccag
gaggcctcccccgtcaagaagactcgacgcaaagggggagccgagcccaatctctttgat
gagctctccgaggacggtgtccaacccatcgccttgaaggacgcggcacaagctcggtat
ttgaactactccctttcggtcatcaccagccgggcactcccggacgtccgcgacggcctc
aagcccgtgcagcggcgcatcctgtaccagatggaccaagaggggatgcgattcgggacg
aagcaccgaaagtgcgccaaagtggtcggggaggtgatgggtaacttccacccccacggc
gactcggcaatctacgacgcgctcgtgcgcatggctcagtccttctcgctccgcgtcccg
ttggtcgacgggagcgggaactttggctctatcgacggggacaacgcggcggccatgcgt
tacaccgagtgccgcatgtccgcgatcgcttcggagctgctcgccgatttaggaaatggt
accgtccccttcaaacccaactacgacggctctcgcctcgagccggtcgtgctccccagc
cgtgtcccaaacttgctcctcaacggcgcgacgggaattgcggtcgggatggcaaccaat
atccccccccataatctcggtgaaatctgccgagccctcctcaaacttctcgcagacccc
gagatcaaagactaccagctggtcgccaatgatgccgtacaaggtcccgatttccccacc
ggcgggatcgtgatcaacaccaaagaagaattgcgagagatctaccgaacgggccagggc
tccattcgcctccgaggcaaaaccgaatccggtggtgaatccaaagggagcaagctactg
cacatcaccgcgattccctacggtgtcaacaaatcggttctcgtcgagcgcattgccgat
atcgtcttgagcggaaagatgcccctgatcgaagacgttcgagatgtctccacgcgcgac
atccgaatcgacttgcagcttcgcaaggacgcagacgaacaaaaggtcttggcctatctc
tacaagcatacgccgctgcaaaccaatttcgcagtcaatatgacttgcttgattccaacc
gagaacccggaactcggtgcaccgaatcgtttgggattgaaagagattctctggttcttt
ctccggttccgtttggaggtcgtcaccaagcgactggagaatgaactggccgcattgctc
aagcgcatgcatatcctcgaaggctttgttcttatcttcgatgcgttggatgagatcatt
cggatcatccggaaatccgaaggcaaagcagatgcagcggagaagatcatggcgagattc
ccggccgcgaaaggaggattggatgctgaccagaccgatgcaattctcgaattgaaattg
tatcgattggctcgattagaaatcaatttgatccaagacgagctgaaagacaaacaaaag
cgcgcgaaagagattcagcgactgctcaaagagaagaccgacgacaccaacaactcgggc
cgttggggtattgtccgacaggagattgaaagcctcatcggtgattacggtaagctgaag
gaaaaccttcgcaagacggagcttctcaccgtcgatgcggaaccggaatacaacgaagaa
gattttatcgtcgcggaagattgtcatgttctgctcacacgcgacggatgggtgaagcga
cagaaatcgattgcagatccatccaagagtcggctgcgagaaggagatagcgtcctcgcg
atcgttgccggatccacccgctccaccgtcgcattcttttcgtcgttcggggtttgctac
accactcggttcatcgacattccggcttcgaccgggcatggcgaaccagtgcagaagtta
ttcaagatgaaggatggggagaaaatcgtctcggtgctgtcgctcgatccgcgcgccatc
ggtaatatcgccgaagatccaaagcatccggattattgtcccgaggttcacggctttgca
gccacttccagcggttttgcgctccgattcggtttgcaacaattcgtcgagccctccacc
aggagcgggcgcaggtttgcgcgtgtcgcaccggaacatggtgtgatcggtgtcgaggcg
actcatggaacggaaaccgtactggcgatcagcgaagaatgccgcgctatggtttgctcg
agcgaggaagtgaactatctatcgggggctggaaagggtgtgatgctcgtcaaactttcc
aagaccgatcgattgctcggattcaagctttctaccgccgaccgagatctacttgtggtc
gaaacaaatcggggcgcgcagaagaccatttccacagcgaaatacaacacgacttcgcga
ggtggacggggtattgaaattcagaagaacggcaagatctcttcgattgtcgtggccccc
atcacctcagcacctacgttggagaactcatga
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