KEGG   Pirellula sp. SH-Sr6A: VN12_11410
Entry
VN12_11410        CDS       T04360                                 
Symbol
hemE
Name
(GenBank) Uroporphyrinogen decarboxylase
  KO
K01599  uroporphyrinogen decarboxylase [EC:4.1.1.37]
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir00860  Porphyrin metabolism
pir01100  Metabolic pathways
pir01110  Biosynthesis of secondary metabolites
pir01240  Biosynthesis of cofactors
Module
pir_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:pir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    VN12_11410 (hemE)
Enzymes [BR:pir01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.37  uroporphyrinogen decarboxylase
     VN12_11410 (hemE)
SSDB
Motif
Pfam: URO-D HEM4
Other DBs
NCBI-ProteinID: AMV32723
UniProt: A0A142Y0E1
LinkDB
Position
complement(2760747..2762735)
AA seq 662 aa
MSDATQPSSSEGSIRTPSFGGLRVAALESRRRDDLSRLIERFGGKPFVSPSMREVAIEKN
KEAVDFAYRVMTGEIGIVIFLTGVGVRQLIAAIEPHVDKQRFLDSLSDIVTIARGPKPVV
AMREFGLQPTHRAPEPNTWREVLQLMDQHVPVASQTIGLQEYGVTNHSLVAGLEARGANV
VHVRVYQWEFPEDTCPLRENIGAICRGERDCLMFTSAHQAVNMLRMADSMGCERELRLAL
RETVVASIGPTTTEMLQHLELPVDLEPEHSKMGHLVQAAAEKTERILKAKRFLGNSGATV
RSQDAHLAGDDNMKEAIEASDFIKACYRQPTEVTPVWLMRQAGRYMAEYRAVREKHSFLE
LCKNPALCAEVMVTAVEKIGVDAAIIFSDLLPILEPMGFDLEFAAGDGPVIHNPIREPAD
IDRVRVLEEMTPLQFVADTVRLTRAALPPKIPVIGFAGSPFTLASYMIEGGGSRNYVHTK
KLMLGDPSAWRVLMDKLVDSIALYLNSQIAAGAQCVQLFDSWAGCLSTNDYRTHVLPFMT
KLLESISPTVPVVNFATGNPMLLSMLRGDARTVVGLDWRVSLDVGWDMVGPDRAVQGNLD
PTVLFAGLDAIRAAVKDVLDRAAGRPGHIFNLGHGILPGTPVDHVIALVDMVHEMTDRRS
RS
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgtccgatgcaacgcagccttcttcctcggaaggttcgatccgcaccccatcctttgga
ggccttcgcgtcgctgcgctcgagagccgcagacgggacgatttgtctcggctgattgag
cgatttggtggaaagcctttcgtgagtccttcgatgcgagaagtcgcaatcgagaagaac
aaggaggcagtcgacttcgcgtaccgggtcatgacgggcgagatagggatcgtcattttc
ttaaccggggtgggggttcggcaattgatcgccgccatcgagccccatgtcgataagcag
cgttttctcgattctctctccgatattgtcacgattgcacgggggcctaagccggtcgtc
gccatgcgagaattcggtctgcagccgacccatcgggccccggagccaaacacatggcga
gaagtgctgcagttgatggaccagcacgtacccgttgccagtcaaacgattggattgcag
gagtacggtgttacgaatcactcactcgtcgcaggcctggaagcacgcggcgcgaacgtg
gtgcacgtgcgtgtttatcagtgggaattccctgaagacacatgtcccctgcgagagaac
atcggcgcgatttgccgtggcgaacgagattgtttgatgttcaccagtgctcatcaagcc
gtcaatatgcttcgtatggccgactcgatgggttgcgaacgggagcttcgactcgcattg
cgcgagacggtggtcgcgtcgatcggtcccaccacgaccgagatgttacagcacttggag
ttgccggtggatttggagccggaacactccaaaatggggcatctggtgcaggccgcagca
gagaaaacagagcgaattttgaaagccaagcggttcctgggcaactccggtgcaacagtt
cgttctcaagacgcgcacctagcaggcgatgacaacatgaaagaagcgatcgaagcgagc
gattttatcaaggcctgttatcggcagcccaccgaggtgaccccggtatggttgatgagg
caagcaggccgctatatggcggagtatcgcgcggtgcgcgagaaacattcgttcttagag
ctctgcaaaaaccctgctttgtgcgccgaggttatggtgactgcggtcgagaaaatcgga
gtggatgctgcgatcattttctccgacttgctccccatcttagagccgatgggctttgac
ttggagttcgccgcaggtgacggacccgtgattcacaatcccatccgcgagcctgccgat
atcgatcgtgtgcgggtgctcgaggaaatgacgccccttcagtttgttgcagacacggta
cgcctgacgcgcgcggcgttacctccgaaaatcccagtcattggctttgctggttctccc
ttcacgttggccagctacatgatcgaagggggcgggtcccgcaattacgtccacaccaag
aagttgatgttgggggatccgtcggcttggcgcgttctcatggacaaactggtcgactcg
atcgccttgtacctcaattcgcagatcgcggccggtgcgcagtgcgtgcaactgttcgat
tcatgggcggggtgcttgtcgacgaacgattatcgaactcatgttctcccgttcatgacc
aagctattggaatcgatatcacccacggtccctgtcgtgaattttgcgactgggaatccg
atgctcctgtccatgttgcgaggcgatgctcgcacagtcgtcgggttggactggcgcgta
tcgcttgatgttggctgggatatggtgggacccgatcgagcggttcaaggaaacttggat
cccacggttttatttgccggtttagatgcgatccgcgcggcggtgaaagatgtgctagac
cgcgctgcaggccgaccgggtcatattttcaatcttgggcatggaattcttccaggaact
cctgtcgaccacgtgatcgcgttggtcgatatggtgcacgagatgacggatcgccgaagc
aggagttaa

DBGET integrated database retrieval system