Pirellula sp. SH-Sr6A: VN12_11410
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Entry
VN12_11410 CDS
T04360
Symbol
hemE
Name
(GenBank) Uroporphyrinogen decarboxylase
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00860
Porphyrin metabolism
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01240
Biosynthesis of cofactors
Module
pir_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VN12_11410 (hemE)
Enzymes [BR:
pir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
VN12_11410 (hemE)
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Motif
Pfam:
URO-D
HEM4
Motif
Other DBs
NCBI-ProteinID:
AMV32723
UniProt:
A0A142Y0E1
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Position
complement(2760747..2762735)
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AA seq
662 aa
AA seq
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MSDATQPSSSEGSIRTPSFGGLRVAALESRRRDDLSRLIERFGGKPFVSPSMREVAIEKN
KEAVDFAYRVMTGEIGIVIFLTGVGVRQLIAAIEPHVDKQRFLDSLSDIVTIARGPKPVV
AMREFGLQPTHRAPEPNTWREVLQLMDQHVPVASQTIGLQEYGVTNHSLVAGLEARGANV
VHVRVYQWEFPEDTCPLRENIGAICRGERDCLMFTSAHQAVNMLRMADSMGCERELRLAL
RETVVASIGPTTTEMLQHLELPVDLEPEHSKMGHLVQAAAEKTERILKAKRFLGNSGATV
RSQDAHLAGDDNMKEAIEASDFIKACYRQPTEVTPVWLMRQAGRYMAEYRAVREKHSFLE
LCKNPALCAEVMVTAVEKIGVDAAIIFSDLLPILEPMGFDLEFAAGDGPVIHNPIREPAD
IDRVRVLEEMTPLQFVADTVRLTRAALPPKIPVIGFAGSPFTLASYMIEGGGSRNYVHTK
KLMLGDPSAWRVLMDKLVDSIALYLNSQIAAGAQCVQLFDSWAGCLSTNDYRTHVLPFMT
KLLESISPTVPVVNFATGNPMLLSMLRGDARTVVGLDWRVSLDVGWDMVGPDRAVQGNLD
PTVLFAGLDAIRAAVKDVLDRAAGRPGHIFNLGHGILPGTPVDHVIALVDMVHEMTDRRS
RS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcaacgcagccttcttcctcggaaggttcgatccgcaccccatcctttgga
ggccttcgcgtcgctgcgctcgagagccgcagacgggacgatttgtctcggctgattgag
cgatttggtggaaagcctttcgtgagtccttcgatgcgagaagtcgcaatcgagaagaac
aaggaggcagtcgacttcgcgtaccgggtcatgacgggcgagatagggatcgtcattttc
ttaaccggggtgggggttcggcaattgatcgccgccatcgagccccatgtcgataagcag
cgttttctcgattctctctccgatattgtcacgattgcacgggggcctaagccggtcgtc
gccatgcgagaattcggtctgcagccgacccatcgggccccggagccaaacacatggcga
gaagtgctgcagttgatggaccagcacgtacccgttgccagtcaaacgattggattgcag
gagtacggtgttacgaatcactcactcgtcgcaggcctggaagcacgcggcgcgaacgtg
gtgcacgtgcgtgtttatcagtgggaattccctgaagacacatgtcccctgcgagagaac
atcggcgcgatttgccgtggcgaacgagattgtttgatgttcaccagtgctcatcaagcc
gtcaatatgcttcgtatggccgactcgatgggttgcgaacgggagcttcgactcgcattg
cgcgagacggtggtcgcgtcgatcggtcccaccacgaccgagatgttacagcacttggag
ttgccggtggatttggagccggaacactccaaaatggggcatctggtgcaggccgcagca
gagaaaacagagcgaattttgaaagccaagcggttcctgggcaactccggtgcaacagtt
cgttctcaagacgcgcacctagcaggcgatgacaacatgaaagaagcgatcgaagcgagc
gattttatcaaggcctgttatcggcagcccaccgaggtgaccccggtatggttgatgagg
caagcaggccgctatatggcggagtatcgcgcggtgcgcgagaaacattcgttcttagag
ctctgcaaaaaccctgctttgtgcgccgaggttatggtgactgcggtcgagaaaatcgga
gtggatgctgcgatcattttctccgacttgctccccatcttagagccgatgggctttgac
ttggagttcgccgcaggtgacggacccgtgattcacaatcccatccgcgagcctgccgat
atcgatcgtgtgcgggtgctcgaggaaatgacgccccttcagtttgttgcagacacggta
cgcctgacgcgcgcggcgttacctccgaaaatcccagtcattggctttgctggttctccc
ttcacgttggccagctacatgatcgaagggggcgggtcccgcaattacgtccacaccaag
aagttgatgttgggggatccgtcggcttggcgcgttctcatggacaaactggtcgactcg
atcgccttgtacctcaattcgcagatcgcggccggtgcgcagtgcgtgcaactgttcgat
tcatgggcggggtgcttgtcgacgaacgattatcgaactcatgttctcccgttcatgacc
aagctattggaatcgatatcacccacggtccctgtcgtgaattttgcgactgggaatccg
atgctcctgtccatgttgcgaggcgatgctcgcacagtcgtcgggttggactggcgcgta
tcgcttgatgttggctgggatatggtgggacccgatcgagcggttcaaggaaacttggat
cccacggttttatttgccggtttagatgcgatccgcgcggcggtgaaagatgtgctagac
cgcgctgcaggccgaccgggtcatattttcaatcttgggcatggaattcttccaggaact
cctgtcgaccacgtgatcgcgttggtcgatatggtgcacgagatgacggatcgccgaagc
aggagttaa
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