Pirellula sp. SH-Sr6A: VN12_11470
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Entry
VN12_11470 CDS
T04360
Name
(GenBank) putative permease YjgP/YjgQ family protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VN12_11470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_11470
Transporters [BR:
pir02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
VN12_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AMV32735
LinkDB
All DBs
Position
complement(2775695..2776891)
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AA seq
398 aa
AA seq
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MIPGKFTRYVLGDVLKMFLLMLISMTLVISLIFVGQQLVAEGVNTLTILKLFPYISLIAL
QYSVPATLLFAVCCVYGRISADNEIIALKSAGISPMRVFRPAWFLGLLLSLPSVWLNDQA
VSWARPGMQQVVLRSIEEILYPALRSQRSYTSEKGFSIHVEDVQDKWLIKPTIWMFSGSN
SQLITIHSEKARISVNLDKDLLTIELIDSFVDIDRDKQMKWNGSQTIELPLNKASKASAT
SSSPTSFSMTEIPDQIRTHSESNERRREQLAANFSFALGTGRYIAFNDPMAAQIQLMVQE
TETRMARFRTEPMRRWALGFSCLAFVWMGVPMAILIKSADYWWSFGLCFIPVLLVYYPVF
GLALEMSKKGTWPAVALWLGNIVLAAIGTWLMRKVIRA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgatccccggcaagttcacgcggtacgtccttggtgacgtgctcaagatgtttctcctg
atgctgatctccatgaccctggtgatctcgttgatctttgtggggcagcaactggtcgct
gagggggtcaatacgctcacgatcttgaagctttttccgtacatttcgctgatcgcgttg
cagtactcggttccggcgacccttctattcgccgtttgctgcgtgtacggtcgcatctct
gccgacaacgagatcatcgccctcaagagcgcgggaatatcgccgatgcgggttttccgg
ccggcttggtttttggggctgttgctgagcctgccttcggtctggctcaatgatcaagcc
gtctcatgggcgaggccgggaatgcagcaagtcgtcctccgaagcatcgaagagattctg
tatcctgcgctgcgatcgcagcgttcttatacatccgagaagggcttttccattcatgtc
gaggatgtgcaggacaagtggctaatcaagcctacgatttggatgttttccggcagcaat
tcgcaacttatcacgatccattccgagaaggcgcgcatctcggtcaatctcgataaagat
ttgttgaccatcgaactcatcgattcgtttgtggatatcgatcgggacaagcagatgaag
tggaatggttcgcagaccatcgagttgccgctgaacaaagcctcgaaagcgagcgcgaca
tcatcgagtccgaccagtttctcgatgactgagattcctgatcagattcgaacgcacagc
gagagcaacgaacggcggcgcgagcagctcgccgcgaatttttcgttcgcgctcggcacg
gggcgatacatcgctttcaacgacccgatggcggcgcagatccagctcatggtccaagag
accgagacacggatggcaaggttccggaccgaaccgatgcgacgatgggcattggggttc
agctgccttgcgtttgtgtggatgggagtgccgatggccattctcattaagagcgctgac
tattggtggagtttcggtctctgttttatccccgtccttttggtgtactaccccgtattc
ggattggcgctcgagatgtccaaaaaggggacttggcccgcagtcgccctttggttgggt
aacatagtgctagcagccatcgggacgtggctgatgcgcaaagtcattcgagcctag
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