Pirellula sp. SH-Sr6A: VN12_11965
Help
Entry
VN12_11965 CDS
T04360
Symbol
rsgA
Name
(GenBank) Putative ribosome biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00730
Thiamine metabolism
pir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VN12_11965 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pir03009
]
VN12_11965 (rsgA)
Enzymes [BR:
pir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
VN12_11965 (rsgA)
Ribosome biogenesis [BR:
pir03009
]
Prokaryotic type
GTPases
VN12_11965 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
GTP_EFTU
nSTAND1
AAA_16
AAA_23
ABC_tran
AAA_29
AAA_15
AAA_22
MMR_HSR1_Xtn
AAA_30
FeoB_N
Ras
SMC_N
Roc
AIG1
RsgA_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMV32833
UniProt:
A0A142Y0Q9
LinkDB
All DBs
Position
complement(2897888..2899051)
Genome browser
AA seq
387 aa
AA seq
DB search
MARKKSNKIRIEFRKKHQSQVRDADLTSQYEANLDEIDTISSERVSGKGELTRHRTVKGS
IEDTSRETLGNVELEVDRGTISGLVLRVHGLESIVKGGDGKIYRCSLRRVLKNLATDQRH
VLVAGDQVRIQREGGEQAWIVRIEPRRSTLSRTSKQRRHIIASNVDQLLIVTSASQPAIK
PNLIDRLLATAEQNHLEACICINKCDLIDVSKLQPLIGCYAQMGYQIALLSAAKGWGISA
LRTITKDRCSVVVGQSGVGKSSILNAIEPGLKQRVQAVSQENEKGKHTTTTAEVFPLSYG
GSLIDTPGVRQFQLWDIVASELTGLFRDIRPFASKCRYPDCSHIHENGCAVKDAVADGRL
DARRYDSYCQIIDSPYEGDRDELDGLE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaagaaaagcaataagatacgaatcgagtttcgcaagaagcaccaatctcag
gtgcgcgacgccgatcttacgagccaatacgaagcaaatctggacgagatcgataccatt
tcgtccgagcgcgtaagcggaaaaggagagctgacgcgccaccgcacggtgaaaggaagc
atagaagacacatcgcgtgagacgctcggcaatgtggagttagaggtagatcgaggaacc
atctcagggcttgtgctgcgagtccacggcttggaatcgatcgtgaaaggtggggatggc
aagatttaccgatgctcgcttcgccgagtgttgaagaacttggcgacggaccaacgacat
gtcctggttgctggcgatcaagttcgaattcagcgagaggggggcgagcaagcctggatc
gttcgtattgaaccccgtcgaagcacattgagtagaacgagcaagcagcgaaggcacatc
atcgcttccaatgtcgatcaactgctcattgtcaccagcgcgtcgcaaccagccatcaag
cccaatcttatcgatcggcttctcgcgaccgcagagcagaaccatctcgaagcctgcatc
tgtatcaataaatgcgatttgatcgacgtttccaagcttcagcccttgatcggatgctat
gcgcaaatgggctatcaaatcgctctgctcagtgcagcgaagggttggggaatcagtgcc
ctgcgaacgattaccaaggaccggtgcagcgtcgtagtcgggcagagcggcgtcgggaaa
tcctctatcctcaacgcgatcgaacccggactgaaacaacgcgtacaagcggtcagtcaa
gagaatgaaaaaggaaaacacaccaccaccaccgcggaggtctttccgctttcctatggc
gggtcactcatcgatactccgggggtccgtcagtttcaactttgggacattgttgcgagc
gagttaacggggctctttcgcgacatacgcccctttgcgtcgaaatgtcgttaccccgat
tgcagccatatccacgaaaatggttgcgccgtgaaagatgccgtagcggatggcaggctc
gatgcgagacgctacgacagttattgtcagattatcgattcgccttatgaaggtgatcga
gacgagttggacggtttggaatag
DBGET
integrated database retrieval system
