Pirellula sp. SH-Sr6A: VN12_12365
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Entry
VN12_12365 CDS
T04360
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VN12_12365 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pir01007
]
VN12_12365 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pir03016
]
VN12_12365 (serS)
Enzymes [BR:
pir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
VN12_12365 (serS)
Amino acid related enzymes [BR:
pir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VN12_12365 (serS)
Transfer RNA biogenesis [BR:
pir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VN12_12365 (serS)
Prokaryotic type
VN12_12365 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AMV32913
UniProt:
A0A142Y113
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All DBs
Position
3023363..3024640
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AA seq
425 aa
AA seq
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MLDRKFVLENLDAVKQNCVNRGVPASNLDRFVEVETRRRAKLTEAEDLNRKANDINSKMK
SATPAEREGLKEQGKLLREQKEAAQHEHDALDKEILGILAHIPNMTNPAAPIGGDDLANL
EIARGKTPIPHFDFPAKDHLELGKLHDLIDFEAGARVAGAGFYFLKNDAVLLELALQQFA
VQQLVRKGFVPVSTPDLANTSTLHGIGFIPRGPETQIYSVENSDLNLVATAEITLGGMYS
GLVLEAEQLPLKLVGISHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLESQSDAIHEE
LRQIECDLFDALEVPYRVVDTATGDLGGPAYRKYDLEAWMPGRGETGEWGEVTSTSNCTD
YQARRLNIRYKNKNEKGTHFVHTLNGTAVAISRAIIAILENHQQADGSIVVPKVLQPWMG
KERIG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgaaagttcgttctcgaaaacctggacgccgtcaaacagaattgtgtgaac
cgaggcgtgcccgcatcgaatttggaccgattcgtcgaagtcgagacgaggcggcgcgcc
aaactgacggaagccgaggatttgaatcggaaggcgaacgacatcaattccaagatgaag
tccgccacccctgcggaacgcgaagggttgaaggagcaggggaagctgctgcgagaacag
aaagaggcggctcagcacgagcacgacgccttggacaaagagattctcggaatcctcgcg
catatcccgaacatgaccaatcctgcggcgccaatcgggggtgacgacctagccaatttg
gagatcgcgcgaggcaagacgccgattccccacttcgattttcccgccaaggatcacttg
gagctcggaaagcttcatgacctgatcgactttgaagcgggagcacgcgtcgcgggagca
ggcttctacttcttgaaaaacgatgccgtcttgctcgagttggctctgcagcaatttgcg
gtgcagcagcttgttcggaaaggctttgttcccgtttcgacacccgatctcgctaatacc
tcgacccttcatggcatcgggttcattcctcgcggacccgagacgcagatttatagtgtc
gagaattccgatttgaatttggtagccaccgcagaaatcacgctcgggggaatgtactcc
ggtttggtcttagaagcggagcaattgcccctcaagctagtcggtatcagccattgcttc
cgcaccgaagccggcgctgcaggccgcgcctccaagggactttatcgcgtccatcagttc
acgaaggtagagatgttcgccttcacgttggaaagccaaagcgatgcgatccacgaagag
cttcgtcagatcgagtgcgatctgttcgatgcgttggaagttccctatcgcgtggtggat
actgccaccggcgacttgggcggccctgcctatcgcaaatacgatttagaggcgtggatg
cccggacggggtgagaccggagagtggggcgaagtaaccagcacctccaactgcaccgat
taccaagcgagacgattgaacattcgctataagaacaagaatgagaaaggaacgcatttc
gtccatacgttaaacgggactgccgttgcgatcagccgcgcgatcattgccattctggag
aaccatcagcaggcggatggttcgattgtcgttcccaaggtcttacagccttggatgggc
aaagaacgtatcggctga
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