Pirellula sp. SH-Sr6A: VN12_13055
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Entry
VN12_13055 CDS
T04360
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pir03021
]
VN12_13055
03009 Ribosome biogenesis [BR:
pir03009
]
VN12_13055
Transcription machinery [BR:
pir03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VN12_13055
Ribosome biogenesis [BR:
pir03009
]
Prokaryotic type
rRNA transcription factors
VN12_13055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
S1
KH_NusA_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMV33046
UniProt:
A0A142Y1D8
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All DBs
Position
3189707..3191062
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AA seq
451 aa
AA seq
DB search
MNPQELLRIVDSLHREKQISPDLVIQAIESALITAAKRQFGEDAEVSVKIAPEGGQISAS
VDGRLLSQDEIGRIGAQTAKQVIIQKLKEAERDARLDEFYGQVGQLVTGIVQRTERGLTI
VQLGNVEAILPRSEQIPGESYHNGSRIRAVIYEVKAAGNRVKIILSRSHPSFVQRLFEQE
IPEIADEVIKINAISREPGYRSKVAVSSSDQRIDCVGACVGMRGNRIKNVTSELAGERID
IVRWSDDPMVLIPNALQPAEVEQVLLCDMIGRAIALVNEEHLSQAIGRFGQNVRLASKLC
SWDIEIMTASELERQIERAMEMFMQLEGMTEEVAQQLVEQGYLSYDDLSVIEPDALMEMG
NWTEDEVNAIVEQAEERAEALEIEEEERKIQEKAEKERRATEELEKKERGQPKPAAAVVA
VEEAPQAAADEPAPQQSENSQPPENGAESQS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcaagaactgctccgaattgtcgattcgttgcatcgcgaaaagcagattagc
ccagatctggtcatccaggcgatcgaatcggcgttgataacagctgccaagcgtcaattt
ggcgaggacgcagaggtatcggtcaagattgcaccggaaggtggtcagatcagtgcttcg
gtggacgggcgtttattgagccaggacgagattggccggatcggcgcccagaccgcaaag
caggtcatcatccagaagctcaaagaagcggagcgcgacgctcgcttggatgaattctat
ggacaggtcggtcaactggtcaccggaatcgtacagcgaaccgagcggggtttgaccatc
gttcagcttggaaacgtcgaggccattctccctcgtagcgaacagatccccggagagtcg
tatcacaacgggtcccgcatccgcgctgtcatttacgaagtcaaggcggccggcaaccgc
gtcaagatcatcctttctcgctcccaccccagcttcgtccagcggctttttgagcaagaa
atccctgaaatcgcagacgaagtcatcaaaatcaatgcgatcagccgcgagcccggctac
cgcagcaaggtagctgtgagcagctccgaccagcgcattgattgcgtgggggcttgcgtg
ggcatgcgaggcaatcggatcaaaaacgtgacgagcgagttggcgggagagcgaatcgac
attgttcgctggagcgacgaccccatggtcctcatccccaatgctttgcagcccgccgag
gtggagcaggtgttgctttgcgatatgatcggccgcgcgatcgctttggttaacgaagag
cacctctcccaggcgatcggtcgtttcggccagaacgtacggctggctagcaagctttgc
agctgggacatcgaaatcatgaccgcctccgaactggagcgtcagatcgagcgggccatg
gaaatgttcatgcagctcgaggggatgaccgaggaggtggcacagcaattggtcgaacag
ggatacctgtcctatgatgacctctccgtcatcgagcccgatgccttgatggaaatgggg
aactggaccgaagacgaagtcaacgcgattgtcgagcaagccgaagagcgagccgaggcg
ttagagatcgaagaagaagaacgaaagattcaggagaaggcagaaaaagaacgacgagcc
accgaagagcttgaaaagaaagagcgagggcaaccgaagcccgcagcggcagtcgtcgct
gtggaggaagccccacaggctgcggcagacgagccagcacctcagcaatctgagaatagc
cagccccccgaaaatggagcagaatcgcaaagctaa
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