Pirellula sp. SH-Sr6A: VN12_13455
Help
Entry
VN12_13455 CDS
T04360
Symbol
gyrA_2
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pir03032
]
VN12_13455 (gyrA_2)
03400 DNA repair and recombination proteins [BR:
pir03400
]
VN12_13455 (gyrA_2)
Enzymes [BR:
pir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VN12_13455 (gyrA_2)
DNA replication proteins [BR:
pir03032
]
Prokaryotic type
DNA Topoisomerases
VN12_13455 (gyrA_2)
DNA repair and recombination proteins [BR:
pir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VN12_13455 (gyrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMV33126
UniProt:
A0A142Y1L6
LinkDB
All DBs
Position
complement(3307051..3309885)
Genome browser
AA seq
944 aa
AA seq
DB search
MSNLPPDDFDPNDPSNLPNADGGGDGEGPGERMIEEAIEDELRNSYLTYAMSVIVSRALP
DVRDGLKPSQRRILVAMNDLSLTPGAARVKCAKIAGDTSGNYHPHGEAIIYPTLVRMAQE
WNMRHVLIDKQGNFGSIAGLPAAAMRYTEARLAPPAAMMLDDLKLDTVDYIPTYDERRTE
PVVLPSKFPNLLVNGAQGIAVGMATSIPPHNLREICAGLIRMIEDPEISISELCEIVPGP
DFPTGGIICGRYSIRQAYNTGRSTIVVRARVDVEEGKKARLIVREIPFQQARDRVVERIA
DLVRNDKIKGISGIRDESDLKEPVRIVIELKQGHDPHIVLNQLYQFSSLQETHSIILLAL
VDGKPRELTLKEMMQEFLRHRVIVIRRRTQFLLASARKRKHVVEGLLLALADIDHIIQII
RNSRTQAEAKEKLMGVECPASMMERALGDRGYTDFQLERGISDTYRLTSVQTDAILRMTL
GQLAGLEQERLAEEHSALLDEISEYRDILGDPVRIYGIIRADLEEISRRYGTDRKTVIDD
EELGNYNMEDLITEETMVVTISTQGYIKRIPATTYRAQKRGGKGIAGMRAEEEDPVEHLF
VASTHAYLLFFTNQGKVYWQKVWEIPQMSRESRGRAVVNLLNLSPDEKIRDCVVVRNFDL
PGHFLMMGTKKGIVKKTELEAYSRPKRGGIIAIKLREDDELVDVVITKPNDQIVLSTSTG
MAIRFSESDARPMGRNTSGVKGISLRKGDEVVGMVVADPTATLLTACEFGYGKRTTFGPG
DEMAGKELPMSDEGSEEDGLIEEEVPVEEPEAEDLGSANRYRTQRRGGKGVIDIKATRRN
GKVVGIAAVHDSDEVLMMTTRGKIQRIAVKDVSVIGRNTQGVRIMSLDEGDSLTAIVRVP
SQDIDPSEIEAASAPIAPVSELPIDESLPESTSESDVSDASEGE
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaatttgccacccgacgattttgatcccaacgatccttcgaaccttcccaatgcg
gatggtgggggggatggcgaggggcccggtgagcggatgatcgaggaggcgatcgaggac
gagctccgcaatagttatttgacctacgcgatgagcgttatcgtcagccgggcgctaccg
gatgttcgagatgggttgaagccgagtcagcgccggatcttggtcgccatgaacgacttg
agccttacccctggtgccgcccgggtcaaatgcgcgaagatcgccggcgatacgtcgggt
aactaccacccgcacggggaagcgatcatctacccgaccctggtccgcatggcgcaggaa
tggaacatgcgccacgtgttgatcgacaagcaagggaactttggatcgatcgcagggtta
cccgcggcggccatgcgatacaccgaagcccgattggctcccccagccgccatgatgctg
gacgacttgaagctggatacggtcgactacatccccacgtatgacgaacggcgcaccgag
cccgtcgtcctgccatcgaaattcccgaacttgctcgtcaacggcgcgcaaggcatcgcg
gtggggatggcgaccagcatccctccgcataatttgcgagagatctgcgccggattgatc
cgcatgatcgaagatcccgagatctcgatcagcgaactgtgcgaaatcgtccccggtccc
gacttcccgaccggcgggatcatctgcggacgctactccatccgacaagcctacaacacc
ggacgctcgacgatcgtggtgcgcgctcgcgtcgatgtggaagaaggcaaaaaggcgagg
ttgatcgttcgagagatcccattccagcaagcccgtgatcgcgtggtggaacggatcgcc
gacctggttcgcaacgacaagatcaaaggcatctccggcattcgcgatgaaagcgatttg
aaagagccggttcgaattgtgatcgagctcaagcaaggtcacgatcctcatatcgttctc
aatcagctttatcagttttcctcactgcaagaaacccattcgatcatccttttggcactc
gtggacggaaagcctcgcgagttgaccctcaaggaaatgatgcaggagtttctgcgacac
cgcgttatcgtcatccggcgacgcacgcagttcttgctcgcctcggctcgaaagcgaaag
cacgtcgtggaggggctgctgctggctctcgccgatatcgatcacatcatccagatcatc
cgcaacagtcgcacgcaggccgaagcgaaggaaaaactgatgggggtcgaatgtcccgca
tcgatgatggagcgagcgttgggcgatcgaggctataccgatttccaactggaacgcggc
ataagcgacacctatcgcttgaccagtgtgcaaaccgacgccattctgcgcatgactctc
ggccagttggctggactggaacaagaaaggttggcggaagaacactcggcattgctagat
gaaatctccgagtaccgcgatatcctaggcgatcctgtacggatctatggaatcatccgc
gccgacctggaagaaatctcccgtcgatacggaaccgatcgaaagaccgtgatcgatgac
gaagaactcgggaactacaacatggaagacctcatcaccgaggaaaccatggtggtcacg
atttccacccaaggctacatcaagcggattccggccaccacctatcgcgcccaaaagcgg
ggaggcaaaggaatcgcggggatgcgagcggaggaagaggatcccgtggagcatcttttt
gttgcgagcacccacgcttacctcctgttcttcaccaaccaaggaaaggtgtactggcaa
aaggtctgggagatcccgcagatgagccgcgagagccgcgggcgggccgtcgtcaatttg
ttgaacctttccccagacgagaagattcgcgactgcgttgtcgtacgaaactttgaccta
cccggccacttcctcatgatgggtaccaagaaggggattgtaaagaagaccgagctggag
gcatacagccgtccgaagagaggtggaatcatcgcaatcaagcttcgagaggacgatgaa
ttggttgatgtggtcatcaccaagccgaacgaccagatcgtactttcgacctcgacaggg
atggcgattcgattctccgaaagcgatgcacgcccgatggggcgcaatacgtccggcgta
aagggtatctcgctgagaaagggtgacgaagtggtcgggatggtggtcgccgatccgaca
gcgacccttcttaccgcttgcgagtttggctacggaaagcgaaccactttcggtccaggc
gatgagatggctggcaaggaattgccgatgtccgacgaaggatccgaggaagatggcttg
atcgaagaagaggtccccgtcgaggaaccggaagccgaagatttaggctctgcgaatcgc
tatcgaacccaacgccgaggtggcaagggtgtcatcgacatcaaagcgacaagacggaac
ggcaaggtggttgggatcgctgcggtgcacgattctgatgaagtcttgatgatgaccacc
cggggcaagatccagcggatcgcggtcaaggacgttagcgtcatcggccgcaacacccaa
ggggtccggattatgagcttggacgaaggcgattcgctcaccgcgatcgttcgggttcca
tcccaagatatcgatccatcggagattgaagccgcatcggcaccgatcgctcccgtttcc
gaattgccgatcgatgagtcgctgcccgaatccacttccgagtccgatgtatcggacgcc
tccgaaggtgaataa
DBGET
integrated database retrieval system
