Pirellula sp. SH-Sr6A: VN12_14925
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Entry
VN12_14925 CDS
T04360
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VN12_14925 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pir03019
]
VN12_14925 (rnc)
03009 Ribosome biogenesis [BR:
pir03009
]
VN12_14925 (rnc)
03036 Chromosome and associated proteins [BR:
pir03036
]
VN12_14925 (rnc)
Enzymes [BR:
pir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
VN12_14925 (rnc)
Messenger RNA biogenesis [BR:
pir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VN12_14925 (rnc)
Ribosome biogenesis [BR:
pir03009
]
Eukaryotic type
90S particles
RNase
VN12_14925 (rnc)
Prokaryotic type
rRNA processing factors
VN12_14925 (rnc)
Chromosome and associated proteins [BR:
pir03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
VN12_14925 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DUF3008
Motif
Other DBs
NCBI-ProteinID:
AMV33417
LinkDB
All DBs
Position
complement(3680619..3681359)
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AA seq
246 aa
AA seq
DB search
MENPEIPAFDETTSPEVKLERCQAIIDYRFRDPSVLMSALTHSSVASTRTQSNERMEFLG
DSILGMVVCDCLFRSYPDYLEGELTKIKSVVVSRRVCAKISRQLRLDECLVVGRGMMKSA
MPRSLLSDVFEAIVAAIFIDGGLESARKFILTHIEPEIRLAADGHHGGNFKSSLQQIAQK
DLKGTPVYRLVDEHGPDHSKQFQVVAEITGKRFAPAWGRNKKEAEQRAAGNALAQLRGED
APFTSM
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatccggagataccagcgttcgacgaaacgaccagccccgaagtgaagctggag
cgatgtcaggcgattatcgattatcgatttcgcgatccttccgtgttgatgtccgctttg
acccactctagcgtcgcatcgactcgaacccaatccaacgaacggatggagttcttgggg
gattccattctcggcatggttgtctgcgattgtctctttcgcagctatcccgattacttg
gaaggagaattgaccaagatcaaatcggtggttgtctcgcgtcgcgtctgcgctaagatt
tcgaggcaactcaggctcgacgaatgcttggtcgtcggacgcggaatgatgaagtccgca
atgcctcgttcgcttctcagcgatgtctttgaagcgatcgtggcggccattttcatcgac
gggggcttggagtctgctcgcaaatttatattgacccacatcgagcctgaaattcggctc
gctgcggacggccatcatggaggaaacttcaaatcctccttgcagcaaatcgctcagaag
gaccttaaagggactccggtgtatcggcttgttgacgaacatggtcccgatcatagcaag
cagtttcaggttgttgcggaaatcacaggcaagcgattcgcgccggcttggggacgcaac
aaaaaagaagcggaacaaagagctgccggaaacgcgctcgcgcaactgagaggagaagac
gcccccttcacgtccatgtag
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