Pirellula sp. SH-Sr6A: VN12_15090
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Entry
VN12_15090 CDS
T04360
Symbol
xylR_2
Name
(GenBank) Xylose operon regulatory protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pir03000
]
VN12_15090 (xylR_2)
Transcription factors [BR:
pir03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VN12_15090 (xylR_2)
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GFIT
Motif
Pfam:
Peripla_BP_3
HTH_18
PBP1_XylR
HTH_AraC
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AMV33450
UniProt:
A0A142Y3U4
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Position
complement(3726300..3727496)
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AA seq
398 aa
AA seq
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MAKRRKTVALLIETSNAYARGILEGIVEYQRTRDQWSVYLPELERGASPPDWLSDWKGDG
VIARIETEAIAAAVSQLQVPTIDVSAARRVPNIPWVETDDVRVADLAFEHLRERGFRHFA
FCGPRGFNWALWRGEQFERRCIDAGLDISVHWTEFRSQSQFAKSVSRKSPESPMDHWLDS
LPKPVGLFCAFDIQAQIVLDHCRNLGIQVPEQIAVIGVDNDPIVCNLAHPSITSVIPDAR
GAGQRAAELLDAWMQRCPRRNTKGPPKSLPESILLKPLGIESRQSTDATAVSSPDIAAAV
RFIRDHACDGIDVSHVLQHIPLSRRKLEYQFVEATGTTPHEMIARVRMERARRLLQETDL
PLEEIANRCGFEHPEYMNVVFKRRYQITPGRFRKQQMT
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacggcgaaaaacggtagcgctcctgatcgagacgtcgaatgcgtacgcgcgg
gggatcctggaaggcattgtcgagtaccagcggacgcgggatcagtggtcggtctacctc
cccgaactggagcgaggggccagcccgccggattggctgagcgattggaaaggagacggg
gtgatcgcgcgcatcgagaccgaggcgatcgcggcggcggtctcgcaattgcaagtcccg
acgatcgatgtgagcgctgctcgacgcgtgccgaacatcccttgggttgaaaccgacgac
gttcgcgttgccgatctcgcgttcgagcatttgcgagaacggggattccggcacttcgca
ttctgcggacccaggggcttcaattgggctctgtggcgcggcgagcaattcgaacggcgt
tgtatcgatgctggtctggatatctcggttcactggacggaattccgatcgcaatcgcag
ttcgcgaagtctgtttctcgcaaatcacccgagtccccgatggaccactggctcgattcc
cttcccaaaccggttggtctcttttgcgcattcgacatccaagcccaaatcgtattagac
cattgtcgcaatctggggattcaagtccccgaacaaattgccgtgatcggagtggacaac
gatccgatcgtctgcaatctggctcacccgtctattaccagtgtcatccccgacgcgcgc
ggcgcagggcaacgagccgccgaactcctcgatgcttggatgcaacgctgcccacgccga
aacaccaaaggccctccgaaatcgctccccgaatcgatcttgctcaaacctctcggtatc
gaatctagacaatccaccgatgcgacggccgtatcgagcccggacatcgccgcagcagtt
cggttcatccgagaccatgcctgcgatggaatcgatgtcagccatgtcctccaacacatt
ccgctgtcccgccgaaaactggaataccaatttgtcgaagcaaccgggaccactccccac
gaaatgatcgcgcgcgttcgcatggaacgggcgcgacgtttgcttcaagaaaccgatcta
cccttagaggaaatcgcaaatcgctgcgggttcgaacacccggagtacatgaacgtcgtc
ttcaaacgacgttaccaaatcaccccgggacgctttcgtaaacaacaaatgacctag
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