KEGG   Pirellula sp. SH-Sr6A: VN12_15160
Entry
VN12_15160        CDS       T04360                                 
Name
(GenBank) Phage-related baseplate assembly protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pir00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VN12_15160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pir02044]
    VN12_15160
Secretion system [BR:pir02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VN12_15160
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345 Sarcoglycan_1 Gp138_C
Other DBs
NCBI-ProteinID: AMV33464
LinkDB
Position
complement(3757592..3759571)
AA seq 659 aa
MSSGVNAQRINKIHGVFDESTIFRKLVAEEHLGRLFSIQVEVLSTKSDISPYLTIGKSVA
IEVANWGESRFFHGIISHFELVGEIGSYFLYKFELKPWFWLLTHTSDCRIHQQLDPSKII
EYVFRTKNGLTDYQSKLTKTYKVRDYCVQYRESDFQFASRLMEQEGIYYYFDHSQSDHKM
ILVDNVSSHAKISGTPTIPFRPPNNAEAADEHIYVWKHRLVIQPGKFVYRDFDYIKPNVN
LEVRLNGEQSHPHSSFEHFDYPGLYSETADGTNYVRVLSELHGSQFAQIQGVAKSWRLRP
GYVFQLSEHPSNSENELYLIISSRTTITSGEIDQARQDSDNESIVEFVAIKKTQQFRTPV
TTPRPIIAGPQTAKVVGKNGEEIWTDNLGRVKVQFPWDREGTSNENSSCWIRVAQIWSGK
SWGAMFIPRIGQEVVVEFLEGDPDRPLITGRVYNTDQVVPYALPDQAATSGIKTRSTPSG
TAETYNELRFVDKKDEELVYFHAEKDFERVVENNDSLKVGFIKKDKGDQTVDVFNNQTIH
VGTQESSDGSQTIEIWKDQKETIKTGDRTTKIEQGNDSLTISAGNQSISIPSGTCTIDAG
QKITLQVGGSSIVIDGSSITLKSTNIKIEAGLSAEMTSTTGKVEASATLDLKGGVININ
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtcgagcggagtcaacgcccaacgcatcaacaagattcacggtgtttttgacgagtcg
acgatcttccgaaaactggttgcagaagaacacttggggcggctgttctccatccaggtc
gaagtcctttcgaccaaatccgacatcagcccctatctgacgatcggcaaatcggttgcg
atcgaagtagcgaactggggagaatcacgattctttcacggaatcatctcgcactttgaa
ctggtcggcgagatcggtagttatttcttgtacaaattcgaattgaagccttggttctgg
ctcttaactcacacgagcgattgccggatccaccagcaattggatccatcgaaaatcatt
gaatatgtttttcgaaccaagaatgggttgaccgattaccaatccaaactcacgaagacg
tacaaggtccgagattactgcgtgcaatatcgagaatcggactttcagttcgcgagccga
ttgatggagcaggaagggatctactattacttcgatcactcgcaatccgaccacaagatg
attttggtcgacaacgtttcatcccacgccaaaatcagcggcacccccacaattccattt
cgaccgcccaacaatgcggaagcggccgacgagcatatttacgtgtggaaacatcgcctg
gtaattcaaccgggcaagtttgtttatagggattttgactacatcaagccgaacgtcaat
ctggaagtccgactcaacggggagcaatcacacccccattcgagcttcgaacatttcgac
taccccggactctactccgaaacagcggatggcactaactacgtgcgagtcctgtcggaa
ttgcatggtagccagttcgcgcaaatccaaggtgttgcaaagtcttggagactaagaccg
ggatacgtcttccaattatccgaacatccatcgaattccgagaatgagctttatctgatc
atctcgtctcgaaccaccatcacttcgggagagatcgaccaagcccgacaggactccgat
aacgaatcgatcgtggagttcgttgcaatcaaaaagacccaacagttccgaacgccggtc
accactcctaggccgattatcgcgggcccccagaccgccaaggttgttggaaagaacgga
gaggaaatatggaccgataatctcggacgagtcaaggttcaattcccttgggatcgcgaa
gggacttccaatgaaaacagctcctgctggattcgcgtcgcgcaaatctggtcaggcaaa
tcctggggagccatgttcattccgcgaatcggtcaagaagtcgtcgtggagtttttggaa
ggtgaccccgatcgtccccttatcaccggtcgtgtctacaacaccgaccaagtcgtccca
tatgcacttcccgatcaagcggcgacgagcggtatcaagaccaggtcgaccccctccggc
accgcagagacgtataacgagttgcgattcgtcgacaagaaagacgaagaactcgtctac
ttccacgccgaaaaggacttcgaacgggtcgtcgaaaacaacgatagcctcaaagttgga
tttatcaaaaaggataaaggcgatcagaccgtcgacgtcttcaacaaccaaaccatccac
gtggggacacaagaatcgagcgacggcagccaaacgatcgagatctggaaggaccaaaag
gagactatcaaaaccggcgatcgcaccacgaagatcgaacaaggaaacgattcgctcact
atctcggctggtaaccaatctatctccattccatcaggcacctgcaccatcgacgctggg
caaaaaatcactttgcaggtcggaggtagtagtattgtcatcgatggatcgagcatcacc
ctcaaatccaccaatatcaaaatcgaagcgggactttcggccgagatgacttcgacaacc
ggaaaagtcgaggcatcggcaacgctcgacttgaagggtggagtgatcaacatcaactaa

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