Pirellula sp. SH-Sr6A: VN12_15680
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Entry
VN12_15680 CDS
T04360
Symbol
tetA
Name
(GenBank) Tetracycline resistance protein, class C
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_15680 (tetA)
01504 Antimicrobial resistance genes [BR:
pir01504
]
VN12_15680 (tetA)
Transporters [BR:
pir02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
VN12_15680 (tetA)
Antimicrobial resistance genes [BR:
pir01504
]
Gene variants
Tetracycline resistance genes
Transporters
VN12_15680 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
TRI12
MotA_ExbB
Motif
Other DBs
NCBI-ProteinID:
AMV33567
UniProt:
A0A142Y2Y1
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All DBs
Position
3914923..3916209
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AA seq
428 aa
AA seq
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MSDSPNHSESSTKGTTKPPRQAAIAFIMITVILDVLSLGLIIPVLQKLIKELVGGDESVA
AFYIGLFGTLWALMQFFCSPIIGALSDRYGRRPVLLVSTFGLGLDFVLLALAPNLTWLLI
GRIITGMTAASFSTAQAYLADVTPPERRTAAFGLFGAAFGIGFVLGPAVGGMLGSIDLRL
PFWASAFLTLANGFYGYFVLPESLPKDKRSAFSWKRANPLGSLQLLRSKPGLLPMAIILL
LYQLAHLAFQNVFVLYTDTHFGWEPWQIGLSLGTVGILNMIVQGGLIRPAIRRFGERKLV
FVGLTGGIIGFAAYTLARDGTTFYWCTILFALMGFFQASINGVMSTRLGPSEQGRLSGAN
SSMMGIAGLIGPSLYATVFAWSVHPDRSPLWQGAPFAVACGILVLALILAFFTVPQRATA
QAAVSTQP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctcccaaccattccgaatcatcgacgaaggggacaacgaaaccgcctcgt
caagctgcgatcgccttcatcatgatcacagtgatcctcgacgttctttcgttggggttg
atcattccggtactgcaaaagttgatcaaagagcttgtcggtggcgacgagtcggtggct
gccttctatatcgggcttttcggaacgctttgggcgttgatgcagtttttctgttcgccc
attatcggtgctctttccgaccgctacggccggcgccccgtgctattggtttcgactttt
gggttggggctggacttcgtgttgctcgcgctggctcccaatttgacgtggttgttgatc
ggccggattatcaccgggatgaccgcggcaagcttctcgaccgcgcaggcttatctcgcc
gacgtcactccgccggagcgtcgaacggcagcgtttggtttgtttggggcggcattcgga
atcgggtttgtgctaggcccggcggtgggtgggatgcttgggtcgatcgatctgcggctt
cccttttgggcttccgcattcctgaccttggcgaatggtttttacggttacttcgtattg
cccgagtcgttgcccaaggacaaacgcagtgccttcagctggaagcgagccaatccgctc
ggttcccttcaattgcttcgatccaagccaggtttattacccatggctattatcctcttg
ctctaccagctcgcgcacttggcatttcagaacgtctttgttctttataccgatacgcac
tttggatgggagccttggcaaatcgggttatcgctcggaacggtcggcatcctcaacatg
atcgtacagggaggtttgatccgacccgcgattcggaggttcggtgaacggaagctggtc
tttgtcggtttgacaggtgggatcattgggttcgcagcctacaccctcgcgcgcgatggg
acgacgttttattggtgtacgatcttgtttgcgttgatgggattctttcaagcttctatc
aacggggtgatgtccacacgattggggccatcggagcagggacgcctatcgggtgcgaat
agctccatgatgggaatcgccgggctgattgggccgtctctttacgccaccgttttcgct
tggtcggtccatcccgaccgctccccgctttggcaaggtgcaccgttcgcagttgcttgc
ggtattctagtcctcgcgttgatcttggcgtttttcaccgtaccccagcgagcgaccgcg
caagctgcggtttccacacaaccgtga
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