Pirellula sp. SH-Sr6A: VN12_16070
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Entry
VN12_16070 CDS
T04360
Symbol
rbsC
Name
(GenBank) Ribose transport system permease protein RbsC
KO
K10440
ribose transport system permease protein
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VN12_16070 (rbsC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_16070 (rbsC)
Transporters [BR:
pir02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VN12_16070 (rbsC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PNTB
Motif
Other DBs
NCBI-ProteinID:
AMV33645
UniProt:
A0A142Y374
LinkDB
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Position
complement(4013753..4014976)
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AA seq
407 aa
AA seq
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MIPKPSLWRTFWGSVEFKLLLAWSAVVLITALLDSGHTYYYQSASSAELILRNTVLLGFF
ALGSSVIIISGGIDLSSGSVIALSATVFGALLILLDPEGFSKGSISTSAVVLAIAGTLLV
GVMIGTLHAWLITAVGLPPFIATLATLVGLRSFGRALAPIMMNGKSQIDFPDRALRNVLK
DVTSISILFLILAILVWIVMSKTVTGRHLHAMGGNEQAARLSGIRTDRLKWFAYVLGAVT
ASIVGIISFADQGSAKPDIMARGYELNAIASSVIGGCSLQGGIGTIPGVVLGCLFLRTVI
DAVSKIVGTGSDVYEGMIVGIVVVLAVTFSQRVDRSAIKKYFSTPIGWASIPILGITAGI
GLLLFFGNQAWYSPLKGILFGVFVTICLAGRALYETVIHKPVIHKPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgattcccaagccctctctttggcgaactttttggggatcggtagagttcaagctgcta
ttagcatggtccgccgtggtcttgatcacggcattgctcgacagcggtcacacttactac
tatcaatcggcaagttccgcggagttgatcctacgcaacacggtcctactcggatttttc
gcgttaggtagttccgtcataatcatctcgggagggatcgacctttcgagtggatcggtt
atcgccctcagtgcgacggtcttcggagccttgctcatactcttggatcctgaaggcttt
tcgaagggttccatcagcacgagcgccgtagtgctcgcgatagcgggaacgttgctggta
ggcgtgatgatcggaacgctgcatgcgtggctcatcacagcggtcgggcttcctccgttc
atcgctaccttagcgactttggttggactgcgaagcttcggccgtgctctggcacctatc
atgatgaacggaaagtcacaaatcgacttccccgaccgagcccttcgcaatgttctcaaa
gatgtaacgagcatttcgatcttgttcttgatcctcgcgatcctcgtctggattgtcatg
agcaagacggtaacgggacggcatctccatgccatgggtggcaatgagcaggccgctcgt
ttgagtggcatccgcaccgatcggttgaagtggttcgcttatgttctgggggcggtgacc
gcatcgatcgtgggaatcatatcatttgccgatcaagggtcggcgaagccggacatcatg
gcccgcggatacgaattgaacgcgatcgcctcctccgtgattggaggctgttcgttgcaa
ggaggaattggaacgatcccgggggtcgtgctgggatgtttgtttttgagaaccgttatt
gatgcggtgagcaaaatcgtcgggacaggttccgatgtgtacgagggcatgattgttggg
atcgttgtcgttctagccgtcacgttcagccaacgcgtcgatcggagcgcgatcaagaag
tacttttcgacgccgatcggttgggccagcattcccatcttgggaatcacagcagggatt
ggactgttgctcttttttggcaatcaagcttggtatagccctctgaaggggattcttttc
ggcgtcttcgtcacgatctgtttggcaggtcgcgctctctacgagacggtgattcacaag
ccggtgatccacaagccaaaatga
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