Pirellula sp. SH-Sr6A: VN12_16490 Help Entry VN12_16490        CDS       T04360                                  Symbol rhsC Name (GenBank) Putative deoxyribonuclease RhsC Organism pir  Pirellula sp. SH-Sr6A SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RHS_repeat Dockerin_1 TEN_YD-shell Big_9 RHS PPC PKD Cadherin_5 CooC_C Planc_extracel Motif Other DBs NCBI-ProteinID:  AMV33729 UniProt:  A0A142Y3C6 LinkDB All DBs Position 4129939..4139403 Genome browser AA seq 3154 aa AA seqDB search MTPSFRSLASSTNRSARSRRAHYKRSKLRSLFVETLEDRRLLNADWRNPVDSIDVDGDGA ISPLDALTVINYINAQGTGTLPANRSTGLPYLDVDGDHGVSALDVLNVVNHINTHGVGIR SLTENESRFVQETSVTITLGQSSGTREFRVRIDSQFDTSDRSSALEDLLAVYLVDPADPT QTLLDRGIDGTALFTLAGTKAEFIPGRVRWDGSVLTINVSELASRDTGVLKFQLLKADAD SGSRVAIQPLSNEVDVEGTLAPKWSMTSAPNAAGGSLNLASLSPVDTIHVQVENVRLDSL TGRFSAELKLRNDGDSIGREVAISFPGLPLSVSLRGRSGTTPEGYPYLNVKPAIQRGGLA RSSWSETVAIEFDNPSLVPFSIRPKLFASANRAPTLATIPALTVMPGGVLQVRLSASDPD GDFVSYSMKTSDGSVSMATGEINSSGVLTFKPSPSQVGTYQFEVSASDGVLETTRSVVLN VVPDPITTTRVSGKILQVNGQPIAGMPIQIGSVQGLTSADGSFTLDLGSSTVVSDAIKVR GELYSGTKVYPFIAEKLAFILEHEVYANVNNLIERPIYLPEIDVASGKTIDPLRNTVVTS SALPGASVEVAASTLMNQQGTPFTGILSMTEVPVTLTPAALPEGLLADLVVTIQPGEMVF TTPTPLSLPNRGGYAPGSLMDLWSINPITGEFDNVGTGQVSSNGSVIETISGGIRNSSWH FFGPPASSGPRIKKKEPEVCPVQAEATSSCEMYSGALLETHELVTYRSQGVSRGIVLSYD SLRADPRPIVRFTFDELDPNQFSVPSAVRLIAELDVSRNGITTEVPGFAGGHGLSGNKNI WRLEPEAGSVGAALQVDLRDQPTGVYDYTLRSGMLGYAGERGFIGTLNESKGQFTSVNSR SSYLGSGWGIDGLLELVENSDGSVLIINGDGSETLYPKQADGQYDRPSGEFATLSKLPNG TFQRVWPDQTVERYGSNKKLISLTDRNGNETRYAYDSAGRLTKLTDPVGLETTLSYSPGL VEINDPASRKTRLNLDGNGNLIRVTDPDGSTRQWRYDSEHRMTGETDPLGNVESSNYGFH GRVTDVVRKDGSVRQYFPIEVQGLFRPEQTAADPILTPLANPIAGRISLQQSSFVDVNGN LTQSLLDDRGQSVSERDSLGLLPNVSRDQRNLPVTATNARGYVTLNTFDEQGNLLTSQDN LSVRLGENPSMIGLMAGDFRRNGEKDLYRFIGKVGERYWIDKIREKYSSSLAITVYTPSG TKLREDMDRLPENGTYTVQVTGPQGAYFGAIRSMSSAEQIEWGKQTHLSIAAGEDVVYRF NAERDQRLVFQHSSPAESDRWIVIGPNGTEVWPIRFPNGPVDEFQILMQDSGEYYLIYEV RASDSINPQTIQFTANLIDSVPQTKMGYGTTYSGSLQPNEEREYKFSGSQGALVYFDLQR AYSGAILELRDPQDRILEQSEIDSFRNRVFQLPSSGTFKLLLKGPLNQVTGYGFTIVDLE SATPAQFDSTIKGTLANDRSAIYRLNGVAGQRFVLSMENASPRIISSDSSYQENYLDGIL TLPHTGEYFLIFDKTSSPTTFTFSSLGLNRIPMVDMTQDIKGTFTTRGELQYFRFQATPN SNVFVKNLGISFITGAKIVGEGVTLFDGLYNQYANLTSYRGESDSNEFVLIAKYPLDADD RSPHNFGFRLLPPSESENPILFGQTVSGRLEINEIESFTFQGRRGTTLHLDRRSMAGPIS TGLRWEWIGPDGNQLSLQSNAEMDFGPFTLPATGSYRLRLSYPYGTQPLNYEFRLTDIAS VPRASIQSPFSGQLDSGSEAHWLQFDAGAGQRVRLEQSTASTRLQVYSPSGRLISDTGTN LVQHIGISETGLHRILVMGRDQNSVAPVSYEWLISLANDTLVSMLGFDTLIAGTARDGDI VATFSGNAGQQILFRQTGFYDPYRSDSVQIAGPSGSIFATAPTDGDLNLVLPDSGVYSVR VVGRNAPFLGTVPYAFILAKYSSITRMNPGTIYSLPAPSPRGIFETFAFEATAGQELTID MIWPNSFHGGMPYSPVSLYIESPDGSMLASTTSLESSPFSVAKSGTHLVRVYVHNGQPLA LRLLRIDTAPKVSRDTLLSGTNSLKFEDVIRRFDVAAGESIRFQTESTQWMVGRHSETKG YWENNEIVWTYVETGPNTFQWEGTAEFSQAGTYTLRRSGSSQAPLEYGIVLSSQPIKPVS PLSGGALSMTKQTYDPTFSQLTSHTDQQGRRTEFDIDPMNGNTRSVTRIVGQPGGDDDLL TSFTYLASGQIETETDPLGRVLDLDYDAQGRLRSRKEAKGTLLETRSLYEYDAAGNISAV VDENGHRTTYQYDSMNRIVRLTQPDPDGSGPLASPITTFTYDAAGNLRTVTDPLGRTTSS TYDSLNRLSSETDSGQNTTKYAYDQAGNITSVTDPLGNVTRMQYDDRNRVTTTIDAAGFA TRFKYDADNNLTSVTDASGNITQFLYDARDRLISETDPMGNVKSYSYNGANELVAQVDRV GRTTRFEYDDLGRLVQEHWFDAQNVKTNSVLYSYDAAGRFTRVQDGSSNYQVTYDALDRP VREQTGGGNGAPSAILDRTYDSVGNVLSTMDTIDGVIGGINEYSYDALNRLTTLTQARAV GSMVTISEKRVDIKYNGQGQFASLSRFGDMAGVQPVATTSFIYDTLNRLTDISHRNPVNA LLNSFAFSYDSANRITRVVDIDGAINYAYDKRDQLTSANHVDPANPDEFYAYDATGNRTS SHQHGTRYVVGDGVAGKSGNNRLTSDGTNQYAYDLEGNLISRTRIDNGAVREFTWDHRNR LASVIDRSSSTGAPAQVVEYTYDAMNRRLTRKVDTTPADAVDGAITAFVYDGDNVLADLL DSDGSGPAPLAMAMRYLHGPSVDQVLAQESASGGVQWMLTDHLGTVRDLVNNRGEVVNQF KYDSYGNVLSESNPTVETRYKYTGREFDAETAMQYNRARYYDAAIGRFLSEDPIGFEGGD ANIYRYVESNPVSNRDPSGMSAFDETSSGSAANQRAMNGVVRDIRSKTPSVPRLRETLDT AGYLGQEGVAGLSNALAGIHGFMFSPVEFATRQAELNEIRRMIRQLTAQIERYKARYAKS CRPAGRQTIENFDELLSMRTMLMAKEAQLMGVQY NT seq 9465 nt NT seq  +upstreamnt  +downstreamnt atgactccctcctttcgctccctcgcatcttcgacgaatcgttccgctcggtctaggaga gctcactacaagcgatccaagttgagaagtctcttcgttgagacattggaagatcgccga ttgctcaatgccgattggcgcaatcccgttgattccatcgatgtggatggagatggagcg atctcgcctctcgacgcattaaccgtcatcaattacatcaatgcacaggggaccggaact cttccagcaaatcgcagtaccggtttgccctacttggacgtggatggtgaccacggggtg tcggcattggacgtcctgaatgtcgtgaaccatatcaacacccacggcgttggcatacgc agtcttactgagaatgaaagccgattcgttcaagaaaccagcgtgacaattactttgggg caatcgagtggaacgagggagtttcgtgttcgtatcgatagccaattcgacacgtcggat cggtcatccgctctcgaggatctgctggctgtctatctggtggatcctgctgatcccacc caaacgctcctggatcgaggaatcgatggaaccgccttgtttacgctcgcgggaacgaag gctgagtttattccaggccgagtccgatgggacggttccgtactgacgatcaatgtgagc gaactcgcttccagagacacaggggtgctcaagtttcagttgctcaaggcggatgcggac agcgggtcgcgtgtcgcaattcaacctctcagtaacgaggtagacgtagaaggaactctc gctccgaaatggtcgatgaccagcgcccccaatgcagcaggtggatcgcttaacttggcg agtctgtcaccagtggataccattcatgtacaggtagaaaacgtccgactcgattctttg acgggacgattttctgctgaactaaaacttcgaaacgatggcgactcgatcggaagagag gttgccatttcctttcccggtcttcctctttcggtttcacttcgcggccggtctgggaca acgccagagggctacccttacctcaatgtaaaacctgctatccaacgcgggggattggct cggagttcttggtccgagactgtcgctatcgaattcgataatccgagtttggttcccttc tcgattcgtcccaagctttttgcttcggccaaccgcgctccgacgcttgcgacgattcct gcgctgacggtcatgcccggcggggttctccaggtgagactctctgcttccgatcccgac ggcgatttcgtttcctactcgatgaagacgagcgacggtagtgtttccatggcaacgggt gaaatcaattcatccggagttttgacttttaagcccagtccatcgcaagtcggaacctat cagtttgaggtgtctgccagcgacggtgtgctcgaaacaacccgttcggtagtgctgaac gtcgtgcccgatccaataacaacgactcgagtctctggaaagatcttgcaagtgaacggg cagccgattgcaggaatgccgatccagattgggtctgtccaaggcctcacatccgcagat ggttcgttcacgctcgatctcggttccagtaccgtcgtcagcgatgcaatcaaggtccgt ggcgagctttatagcggcacaaaggtgtatccgttcattgcggagaagcttgcgtttatt cttgagcatgaagtctatgcgaatgtgaataacctgatcgaacgaccgatctatctgccc gagatcgacgttgccagcggaaaaaccatcgatcccttacgcaataccgtcgtcacatcg agtgcccttcccggggctagtgtcgaggtcgcggccagcaccttgatgaaccagcagggg accccgttcaccggcattcttagcatgacagaggtacctgttactctgacccctgctgcg ctacccgaaggcttgctcgccgatctagtcgtgaccattcaaccgggagaaatggtcttc accacaccgactcctttgtcgcttcccaatcgaggaggctacgcacccggtagcctcatg gatttgtggtccatcaatccgatcacgggcgagttcgacaacgtgggtacgggacaagtc agttccaacggtagcgtcatcgaaacgatcagcggtggcattcgaaattctagctggcac ttttttggcccaccggcctcgtcgggacctcgaattaagaagaaagagcccgaggtctgt ccggtccaagctgaggcgacatccagttgcgagatgtactccggagcacttctcgaaact catgaattggtcacgtaccggtcgcaaggagtttcgcgagggattgtgttgtcgtacgat tcgttgcgtgctgaccctagaccgatcgttcgctttaccttcgatgagttggatcccaat cagttttcggtcccgagtgcggtacgattgatcgcagaactcgatgtgagccgaaatgga atcacaacggaagttcctggtttcgctggcggccacgggctgagtggcaacaaaaacatt tggcgtctggaaccagaagcaggctcggtcggtgccgctctgcaagtagatttgcgtgac caaccgacaggagtctacgactatacccttcggtccggcatgttgggctatgctggcgaa cgtggattcattggcacgctcaacgaatcaaaggggcagttcacatcggtcaatagccgc agcagctatctgggatcgggctggggaatcgacgggctcctggagctcgtcgagaacagt gatggatctgttttgattatcaacggtgatggcagcgaaacactctatcctaagcaagcc gatggacaatacgatcgcccatcgggagagttcgctacgttgagcaagttgccaaacgga acattccaacgtgtttggccagatcagacggtagagcgatatggttccaataaaaagctg atctctttgacggatcgcaatggaaatgagacccgatacgcgtacgacagtgccgggcgg cttacaaagcttactgaccccgtcggcttagagacaacgctatcctactcaccgggcctg gtggagatcaacgatccagcgtcccgcaagactcgacttaacctggatggaaatgggaat ctcatccgagtcaccgatcctgacggttcgacgcgccaatggcgctacgatagcgagcat cgcatgacaggtgaaaccgacccattaggcaacgtcgaaagttccaactatggatttcac ggacgcgtaaccgacgtcgttcgcaaggatggatccgtgcgacagtattttccgatcgag gtccaaggtttatttcgacccgaacaaacggcagcggatccgattctcactccattggcc aatcccatcgccgggagaatctctctacagcaatcctctttcgtcgatgtcaacgggaat ctgacgcaaagcctgctcgatgatcgcggccagagtgtatccgaacgcgatagtcttgga ttgcttcctaacgtttcccgcgaccaacgcaacttgccagtcaccgccaccaacgcgaga ggatacgtcactttgaatacgtttgatgaacaaggcaatctactgacgtctcaagacaat ctttcggtccggctaggtgaaaacccctcgatgattggacttatggcaggtgacttcagg agaaacggtgagaaggatttgtatcgttttattggcaaggttggagaacgctactggatc gacaaaattcgcgaaaagtacagcagttcgctggccattacggtctataccccttcgggt acgaaactccgagaagatatggatcgacttccggagaacggaacgtacacggtccaggtc acgggcccgcaaggcgcgtactttggggccattcggtcgatgagttcggcggagcagatc gaatggggaaagcaaacacacctttcgatcgcagcgggcgaagacgtcgtctaccgtttt aacgccgagcgagatcagaggctggtgtttcaacactcatcgcccgctgagtcggatcgt tggatcgtgattggtccgaatgggaccgaggtatggcctattcgctttccaaacggtcca gtcgatgaattccaaatcctaatgcaggatagcggagagtattatttgatttatgaggtt cgggcaagcgattcgataaatccgcagacgatacaatttacggcgaatctgatcgattcc gtcccccaaaccaaaatgggctatggaacgacttactcaggctcgttgcaacccaacgag gaacgcgaatacaagtttagcggttcgcaaggggcacttgtttatttcgacctccaacgt gcatatagcggtgcaatactggaattgcgggatccacaggatcgaattcttgaacagagc gagatagattcatttcgcaacagagtctttcagttaccgagctctggaacgttcaaactg ctactgaaaggtccgctcaatcaagttaccggctacggctttaccatcgtcgatctcgaa tcggccacgccggcccaattcgactccacgatcaaaggtaccttagcaaacgaccgatcg gcaatctatcgactgaacggcgtcgccggtcagcgatttgttttaagcatggaaaatgca tccccacgaatcatttcctccgattcttcctaccaagaaaactacctggatggaatcctt acccttccccacacaggtgagtactttttaatctttgacaaaacgagtagtccgacgact tttacgtttagcagccttggtttgaatcgcattcccatggtcgatatgacccaagacatc aagggaacattcacgactcggggcgagctgcagtactttcgattccaagctaccccgaac tcgaacgtcttcgtaaagaatcttggcatctccttcatcaccggtgcgaagattgtggga gaaggagtgaccttatttgatggtctctacaatcagtacgccaatcttacaagttaccgg ggggagagtgactccaatgaatttgtcctcatcgccaaatatccgctggatgcagacgat aggtctccccacaattttggatttcgattgttaccaccatcggagagcgaaaatcctatc ctcttcggacagacggtctctggtcgtttggagatcaatgaaatcgagagtttcaccttt cagggaaggaggggaactacgctccatctcgatcgacgctcgatggcaggccccatctcc accggacttaggtgggaatggattgggcctgacggaaatcaactttccctgcagagtaat gcggaaatggatttcggaccgtttaccctgcctgcgacaggatcgtatcgattgcggttg tcttacccgtacggtacccagcctttgaattatgagtttcgattaacggatatagcctct gttccccgcgcgtcgattcaaagtcctttttcgggtcagctcgatagcggttcggaggct cactggttgcaattcgacgcgggtgcaggtcaacgtgtgcgattggaacaatccactgcg tcaacaaggctgcaagtgtattcccccagcggtaggctgatttcggatacgggaacgaac ctagttcaacatattgggatttcggaaacaggtctgcatcgtatcctcgtgatgggacgt gaccagaattcggtcgcaccggtttcttatgagtggctcatttcgctagccaacgacacg ctcgtttccatgttgggatttgacaccttgatagcagggactgcgagagatggtgacatc gtggcaaccttctcggggaatgcaggtcaacaaattctctttcggcaaaccgggttttat gacccgtatcggagtgacagtgtgcaaattgctggcccctccggcagcatcttcgccacc gcccccacggacggcgatctcaatttggtattacccgattcaggagtttactccgttcgt gtcgtaggtcgaaatgcgccgtttttgggaacggtcccctacgcatttatcctcgcgaaa tactcttccatcacgcgaatgaatccgggaaccatctactcccttcctgctccgagcccg cgcggcattttcgagaccttcgccttcgaagccacagcgggtcaggagctgacgatcgac atgatctggccgaattcgttccatggcgggatgccttattcaccagtgtcgctttatatc gaatcacccgatggtagcatgctcgcatcaaccacatctctcgaatcgagtcccttttct gttgccaaaagcggtactcatttagttcgagtttacgtgcataatggccaacccttagcc ctacggctactccgtatcgatacagcccccaaggtatcgcgcgacacgttactctccggg accaattcattgaaatttgaggatgtgattcgtcgtttcgatgtggctgcaggggagagt attcgtttccaaaccgaaagcacccagtggatggttggtcggcactccgagaccaagggg tactgggaaaataatgagattgtttggacctacgttgaaacaggccccaatacttttcaa tgggagggtacggcggaattctctcaagcggggacctatacgttgcgacgcagcggttcc tcgcaagcaccgctcgaatacgggatcgtcctgtcatctcaaccgatcaagcctgtttcg cctttgtcgggtggagcattgagcatgacgaagcaaacgtacgatccgacatttagtcaa ctgaccagccataccgatcagcaagggcggcgcacggagttcgacattgaccccatgaat ggcaatacacgatcggtcaccaggatcgtcggccagccgggaggtgacgacgatttgttg acaagctttacgtatttggcgtcggggcaaatcgaaacagagaccgatcctttgggacga gtcttggacttggattacgacgcgcagggaagactccgatcgcgaaaagaggcaaaagga acgctgctagaaacacgaagcctttatgaatacgacgccgccggcaatatttcggcagtg gtggacgaaaatggccatcgtaccacttaccagtacgactcgatgaaccgaatcgtgcgg cttacgcaaccagacccggacggtagtggaccacttgcgtctcccatcacgacgttcact tacgacgcagcaggcaatttgcgaacagttaccgacccgctgggacgaaccacctcgtcg acttacgattcgttgaatcgcttatcgtcggaaacagattcggggcagaacaccacgaaa tacgcgtacgatcaagcggggaatattaccagcgtcacggacccgctcgggaacgtaacg cgaatgcagtacgacgatcgcaatcgtgttaccacaactattgatgccgctggcttcgcg actcgtttcaaatacgatgcggacaacaatctgacttcggtgacagatgcgagtggcaat atcacgcaatttctatatgacgcacgcgatcggcttatctcggaaacggatccgatgggg aatgtaaagtcgtattcgtacaacggggcgaacgaattagtcgcacaggtcgaccgcgtg ggacgtacgacccgttttgagtacgacgatctcggccgattggtccaggaacattggttc gatgcgcagaatgtgaagacgaactccgtcctctattcctatgacgcagcgggtcggttt acccgtgttcaagatggcagcagcaattatcaagtcacctacgatgcgctcgaccgacca gtacgcgagcagacgggtgggggaaacggagcaccatcggccattctcgatcgaacctac gactcggtaggtaatgttctatccacgatggataccatcgatggtgttatcgggggtatc aacgaatactcgtacgatgccctcaatcgtttgaccacgctgacgcaggctcgcgccgtg ggttcgatggtgactatttcagaaaagcgcgtcgacataaagtacaacggacagggacaa ttcgcgtcgctctcgcgtttcggcgacatggccggtgtacagccggtagcaacaacgagt tttatctacgacacgttgaatcgcttgacggacatttcgcatcgcaatcccgtcaatgcg ttactcaattcctttgcattttcttacgactccgcaaatcggatcacacgggttgtcgat atcgatggcgcaatcaattacgcttacgataaacgcgatcaattgacttcggcgaatcac gtggacccggccaatccggatgagttttatgcgtacgacgcgacgggcaatcgaacatca tcgcaccaacatggtacccgttatgttgtaggggatggagttgcgggaaaaagtggaaac aatcgtctcaccagcgatggtacgaatcaatacgcgtatgatctcgaaggaaacttgata tctcgtacgcgaatcgacaacggagcggtccgcgagtttacctgggaccatcgcaatcgc ttggcgagcgtaatagaccggtcaagttctacgggggcgcccgcgcaggttgtcgagtac acctatgacgccatgaatcgacgattaacgaggaaggtcgacacgacacctgccgatgca gtggatggagcgatcacggccttcgtctacgatggagacaatgttctcgccgacttgctc gactcggatggcagcggtccagcaccgttggccatggcgatgcgttatctgcatggtcct tcggtcgatcaagtcctggcgcaagagtccgcaagtggcggcgttcagtggatgctgacc gatcatttgggtaccgttcgcgacttggtgaacaatcgcggtgaagtggtcaatcagttc aagtacgacagttacggcaatgttctatccgaatcgaatccaacggttgaaacgcgatac aaatacaccggccgggagtttgatgccgaaacggccatgcaatacaaccgcgcgcggtac tacgacgctgcgatcgggcgttttctaagcgaagatccgattggattcgaagggggggac gcgaatatctaccgttatgtggaaagcaatccagttagcaatcgagatccgagcgggatg agtgccttcgatgaaacgtcttctggatcagccgccaatcaaagggcgatgaatggtgtt gtccgggatattcgctccaaaacccccagtgttcctaggttgcgagaaacactcgatacc gcggggtaccttggccaggaaggtgttgctggactgagcaatgcacttgctgggattcat ggcttcatgttttcacccgtagagtttgcaactcggcaggcggagttaaatgagattaga cggatgattcgtcagcttaccgcacaaattgagcgatataaggctcgatacgcaaagtcc tgccgtcctgctggtcggcagaccattgagaacttcgatgaattactttccatgcgaaca atgctgatggcaaaagaagcgcaactcatgggtgtacagtactag

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