Pirellula sp. SH-Sr6A: VN12_17320
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Entry
VN12_17320 CDS
T04360
Symbol
thrS
Name
(GenBank) Threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VN12_17320 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pir01007
]
VN12_17320 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pir03016
]
VN12_17320 (thrS)
Enzymes [BR:
pir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
VN12_17320 (thrS)
Amino acid related enzymes [BR:
pir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VN12_17320 (thrS)
Transfer RNA biogenesis [BR:
pir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VN12_17320 (thrS)
Prokaryotic type
VN12_17320 (thrS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
AMV33893
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All DBs
Position
4321222..4323414
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AA seq
730 aa
AA seq
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MLEIQLPDGSVVQHPDDASPLSVAESIGSRLAKAVIAAKVGDHVIDATRSLHGFAGKGPI
PLRLLTEKDPEALGVLRHSCAHVMARAIMRLFPGVSLAFGPTINNGFYYDFDLPRKLSEE
DFAAIEAEMAKIVEKGESFEQFSLNRQQAIELCSDMKQALKVEHIQTGLASHDSLGFYRQ
GEFVDLCRGPHIPDASRIKAFKVMSVAGSYWKGDASGKQLQRVYGTAWFSQKDMQAYLDQ
VEEAKKRDHRVIGKKLGLFQISAEVGQGMCLWLPKGARIRSLLEDFLRKEMLKRGYEPVY
SPHLGRVELYETSGHFPYYRDSQFPPLFASDAGALVDAWIRRLEDPNGLQQVHETAFLQS
AEVLGCELKGYDLLSPASDRIAILQQWQRQHERYLVKPMNCPHHAQIFKAAPRSYKQLPL
RLFEFGTVYRFEQTGELNGMLRVRGLTQDDAHIFCTQDQVEQEFRNTIELTRLVLESVGL
KDYRVQLSLRDPKSDKYVGSEENWQKAEAALRRVLTESGLNFSTAEGEAAFYGPKADFMV
RDCIGRQWQLGTVQLDYNLPERFQLEYVGADNKTHRPVMIHRAPFGSMERFVGMLTEHFA
GAFPMWLAPEQVRICPLSEKSNDYALELEKRFTEAGFRVTTDLRGAKVQAKIRDAQLELI
PYMAVVGPREAETQSIALRDRISGELGTMPVTEVLELLGSEVQERRIRQVAENKLVATSE
EPQETAENEY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaatccaactgccggatggctccgttgtgcaacatcccgatgacgcgagcccc
ctttcggtggccgaatcgatcggctccaggcttgcgaaagcagtcatcgctgcgaaagtg
ggcgatcacgttatcgacgcgactcgttctctgcatgggttcgcagggaagggccccatt
ccccttcgcctcctgaccgaaaaagacccagaagcactcggtgttctccgtcattcctgt
gcccacgtcatggctcgagccatcatgcggctctttccaggcgtatcactggcgtttggt
ccgacgatcaataatggtttctactacgatttcgacctccccagaaaactgagcgaagag
gacttcgctgcgatcgaagcggaaatggcgaagatcgttgagaagggggaatcatttgag
caattctctctcaaccgccagcaagcgatcgagctgtgcagcgacatgaagcaggctctc
aaagtggagcatatccagaccggtctcgcctcccacgattcgctcggtttctaccgccaa
ggggaatttgtggacctatgccgcggtccccatattccggacgcgagccgcatcaaggca
ttcaaagtcatgagtgtcgcgggctcgtactggaaaggggacgcgtccggtaaacagctt
caacgggtctatggtactgcttggttcagccagaaagatatgcaggcatatctcgatcaa
gtggaggaggcgaagaagcgagatcaccgcgtgatcggtaaaaagctcgggctgttccaa
atcagcgccgaagttggccaaggcatgtgtttgtggcttccaaagggcgctcgcattcgc
agtttgctcgaagatttcttgcgcaaagaaatgctcaaacggggttatgaaccggtctac
agtcctcacttgggccgcgtcgaactctacgaaaccagcggtcacttcccctattaccgc
gatagtcagtttcccccccttttcgccagcgacgccggtgcattggtcgacgcttggatc
cgacgacttgaggatccaaatgggttgcagcaggtccacgaaaccgccttcctccaatcc
gcagaagtgctcggttgcgagttgaagggctacgatctactgtctccagcttccgatcgg
atcgcgatcctgcaacagtggcagcgtcaacatgaacgctatttggtcaaaccaatgaac
tgcccgcaccacgcgcagatcttcaaagcagcacctcgatcctacaagcagcttccactg
cgcctctttgaattcggcaccgtgtatcgctttgaacaaaccggtgagctgaacgggatg
ctgcgcgttcgggggctgacccaagacgatgcgcacatcttctgcacccaggaccaagtc
gaacaagagtttcgtaataccatcgagttgacacgactggtgctcgagtcggtggggttg
aaggactatcgcgttcaattgtcccttcgcgacccgaagagcgataagtatgtcggttcg
gaagagaattggcaaaaggccgaagcggccttgcgtcgcgtcctcacggagtcaggtctt
aacttctctacggccgaaggagaagctgcgttctacggtcccaaggcagacttcatggtc
cgcgattgcatcggtcgacagtggcagctcggtaccgttcagctcgattacaacttgcca
gagcggtttcagctggagtatgtcggagcggataacaaaacccaccgccccgtcatgatc
caccgagctccgtttggttcgatggagcgattcgttggtatgctgaccgagcactttgcg
ggtgcgttcccgatgtggctggctcccgagcaagtgcgcatttgcccgttgagcgagaag
tcgaacgattacgcgctcgagctggaaaagcgattcaccgaggcgggattccgagtcact
accgatttgcgcggtgcgaaagtccaagccaagattcgcgacgcccaactagagctgatc
ccctatatggccgtcgtgggcccgcgcgaagcggaaacccaatcgatcgcgcttcgggat
cggatctccggtgagctcggaaccatgcccgtcacggaagttctcgagctattggggagc
gaagtgcaagagcgtcggatccgtcaagtcgctgaaaacaagctggtggcgacatcagaa
gagccccaagaaaccgcagagaacgaatactag
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