KEGG   Pirellula sp. SH-Sr6A: VN12_17385
Entry
VN12_17385        CDS       T04360                                 
Symbol
polX
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
pir  Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:pir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pir03400]
    VN12_17385 (polX)
DNA repair and recombination proteins [BR:pir03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    VN12_17385 (polX)
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 PHP HHH_5 DNA_pol_B_palm HHH DNA_pol_lambd_f GHL6 NTP_transf_2
Other DBs
NCBI-ProteinID: AMV33906
UniProt: A0A142Y3X2
LinkDB
Position
4338368..4340098
AA seq 576 aa
MISNVEIANLFEEMADLLELSGENAFRIRAYRNGAKAIAEMSDSAATWVREERDLTSVEG
IGETLAEKTKVIVETGHLPQLEKLRAAVPASLRSIMAIPGLGAKKAMKLFQELGVQDLAG
LRSACESGLVANLKGFGEKTQTSILANMQIAEKAATRILSDAAETLVQHIRKHMSQCPTL
ERIEFAGSYRRGKESVGDLDVLVTSVDPTAVMDHFGKLSMIHEVIQRGDTKMSVRVQDSF
QVDLRVVDDASWGAALQYFTGSKEHNVRIRSMAKAKRYKINEYGVFTTADGAHRVAGANE
EEIYRLLDLPWIPPELREDRLEFEPDSNKTIQQLIELGDVRGDLHMHTHATDGENSIEEM
VEAAKQRGLCYIAITDHSKRVSMARGLDENRLREQWKTIDAINRNSDGTFWIFKGVECDI
LENGKMDLADDCLAEADWVIGSIHYGQKQPRAQITERILNAIHHPHVHMIGHPTGRLIGR
REPYDVDLEQVMSAAVEKGKVLELNANPHRLDLNDLHTTTAVRLGITIAIDTDAHSTQSL
DLMKFGVRQARRAGVRASQVLNTLSLSDIRPRLGVR
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgatttcaaacgtcgaaattgcgaatctctttgaagaaatggcggacttgctcgagcta
tctggcgagaatgcatttcgcatccgagcctaccgcaatggggccaaggccatcgccgaa
atgtccgacagcgctgcgacctgggtccgcgaggaaagagatctcacgagcgtagaaggg
atcggggaaacgttggccgaaaagacgaaggtcatcgtcgagacaggacatttacctcaa
ctcgaaaaactgcgagccgccgtccctgcatcgttgcggtctatcatggcgatccctgga
ctgggggccaaaaaagcgatgaagctcttccaagagctgggcgttcaagatctcgcaggg
ctccgatccgcgtgcgaatccggcttggtcgctaacctcaaaggattcggcgagaaaacg
caaaccagtatccttgcgaacatgcaaatcgccgagaaagccgcaacccggatcttgtcc
gatgcagcggagactctcgttcagcacattcgcaagcacatgtcgcagtgcccgacgctg
gagcgaatcgagttcgccggaagctaccgacggggtaaggaatcggtcggcgatctcgat
gtgttggtcaccagcgtcgatcctactgcggtgatggatcacttcggaaaactctccatg
atccacgaagtcatccagcgaggcgacacaaagatgagcgtacgtgtccaggattccttt
caagtcgatttgagggttgtcgacgatgcgagctggggtgctgcccttcagtacttcacc
ggcagcaaagagcacaatgttcgcattcggtccatggcaaaagcgaagcggtacaagatc
aacgagtatggtgttttcactacggcagatggagcacatcgtgtcgcgggcgcgaacgaa
gaggaaatctatcggttgctcgatctgccctggatcccccccgagttgcgtgaagaccgt
ttggagtttgagcctgatagcaacaaaacgattcagcaactgatcgagcttggagacgtt
cgcggggatctacacatgcacacccatgcgaccgacggcgaaaactcgatcgaagagatg
gtagaggcggccaagcaacgagggctttgttacatcgcgatcaccgatcactcgaaacgg
gttagcatggctaggggcttggatgaaaatcgcttgcgtgagcaatggaagacaatcgat
gctatcaaccgaaactcagacggcactttctggatcttcaaaggagtcgaatgcgacata
ctcgagaacgggaaaatggatttggccgacgactgcctcgcagaggcggattgggtgatc
ggcagtattcattacgggcaaaagcaacctcgagcccaaatcaccgaacggattctcaat
gcgattcatcacccgcatgtccatatgattggacacccaacaggtaggctgattggcaga
cgcgagccctacgacgtggatttggagcaagtcatgtcggccgctgtcgaaaaaggaaaa
gtgcttgaactcaacgccaatccccatcgactcgatttgaacgatctccacacgaccacc
gctgtgagactagggatcacgatcgccatcgataccgatgcgcactctacccagagcttg
gatttgatgaaattcggagtgcgccaagctcgtcgcgctggagtgagggcatcgcaagtg
ctcaataccctttccctttccgatattcgaccgcgtctaggagttcggtga

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