Pirellula sp. SH-Sr6A: VN12_17610
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Entry
VN12_17610 CDS
T04360
Symbol
pdp
Name
(GenBank) Pyrimidine-nucleoside phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00240
Pyrimidine metabolism
pir01100
Metabolic pathways
pir01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VN12_17610 (pdp)
Enzymes [BR:
pir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
VN12_17610 (pdp)
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GFIT
Motif
Pfam:
Glycos_transf_3
Glycos_trans_3N
PYNP_C
ChapFlgA
Motif
Other DBs
NCBI-ProteinID:
AMV33951
UniProt:
A0A142Y452
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Position
4395738..4397024
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AA seq
428 aa
AA seq
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MIPAKLIAKKRDGHELSTEEIRDVIVAYAKGDLPEYQMAALAMAIYLRGMTDREIIDLTM
AMVASGDTLAPIGSTPRVDKHSTGGLGDKTSLIIAPMLACLGFHVPMVSGRGLGITGGTL
DKLEAIPGYRTDLNENEIAKQLENVGCTITGATDRLVPADRKLYALRDVTATVPSIPLIT
ASIMSKKIAESLHGLVLDVKFGSGSFQRDASQARVLKSKLQRIGELAGVKTFALLSDMTQ
PLGEMIGNACEVLEAIEVLQGRGSSSVRSLSIELSARLLTCLNPSCDLAIQRHRLTGLLE
SGEAFAKFEQMVVAQGGDWKRMAPLEKENPVLASPSMRGVLTEMDCLAIGYGMIDLGGGR
AKKEDVVKPGVGIRWLTPLGTVVTPGQTLAVIYSNDRMEASAVGEAIKKGLKFDSRSTRE
FPPLWDAN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagctaaattgatcgccaaaaagcgagatggtcacgagttgtccaccgaggaa
attcgggatgtgatcgtcgcgtacgcgaagggagatttgcctgagtaccagatggcggcc
ctagctatggcgatttatctacgaggaatgaccgaccgagaaatcatcgatctcaccatg
gcaatggtggcgtcgggagatacgcttgcaccgattggctcgacccctcgagtggacaag
cactccacgggaggattgggggataagacttcattgatcatagcgcccatgctagcctgt
ttgggattccatgtcccgatggtcagcggacgcggtttgggtatcaccggaggaacgctt
gataagcttgaggcaataccgggatatcgaaccgatctcaatgaaaacgagattgccaaa
cagcttgagaatgttgggtgcacgatcaccggtgcaacggatcgtctcgttccagcagac
cgcaaactttatgctcttcgcgatgtgaccgcgactgttccgtccattccattgattacg
gcgagcatcatgtcaaagaagatcgccgagtctctccacggtcttgtgctcgacgttaag
ttcgggagcggaagttttcagcgcgatgcatcgcaggctcgcgtattgaagtcgaagttg
cagaggattggcgagttggctggggtcaagacgtttgcacttctttcagacatgacccaa
cctttgggggaaatgattggaaacgcatgcgaggtgctggaggctatcgaagtgttgcaa
ggcagggggagttcttcggttcgaagtctctcgatcgagctatcggcacgactgctgact
tgtctcaatccctcgtgtgatttggcaattcagaggcatcggctgaccggtttgctggag
tcgggtgaagcgttcgcgaaattcgaacagatggttgtagcgcaaggaggggattggaaa
cgtatggctccgctggagaaagagaatccggtccttgcatccccttcgatgcgaggagtt
ttgacggaaatggattgccttgcaatcggctatgggatgatcgatttgggaggaggaaga
gcgaaaaaggaagatgtggtcaagccaggagttggaattcgatggctgacacccctcggc
acggtcgtcacgcctggtcaaaccctcgcggtcatctattccaatgaccgcatggaagcg
tccgcggtaggggaagcgatcaaaaagggattaaaattcgattcccgaagcacgcgagaa
tttccgcctctttgggatgcgaactga
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