Pirellula sp. SH-Sr6A: VN12_17930
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Entry
VN12_17930 CDS
T04360
Symbol
rpsA_1
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
VN12_17930 (rpsA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pir03011
]
VN12_17930 (rpsA_1)
Ribosome [BR:
pir03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
VN12_17930 (rpsA_1)
Bacteria
VN12_17930 (rpsA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
CsrA
DUF2110
CEP76-C2
Motif
Other DBs
NCBI-ProteinID:
AMV34014
UniProt:
A0A142Y4I3
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All DBs
Position
complement(4462053..4463846)
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AA seq
597 aa
AA seq
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MVNRTLIRSLEDDLLEQELDMMFGDTAEELILDSLEDANRQFDVNQIVEGKIVEINDEFV
VVDVGFKSEGAIHKNEWEEGEPPPQIGDTVKVLIEEVEDQHTAPEDSRAMISLSKKKAEK
IIQWEKMMASVQEGQVVTGTVIRKIKGGLLVDIGVNVFLPASQVDIRRPNDIGDYIGRVV
QCEVLKIDETRRNIVVSRRSLIEKQREEDREHLMAELEVGQIRKGIVKNIADFGAFVDLG
GIDGLLHITDMSWERIGHPTEMVAIDQEIEVKILQIDREKQKIALGLKQKQNNPWTNIAD
KYPVGSTVPGEVVNVMSYGAFVKLEPGIEGLVHISEMSWTRRINHPSEMVQIGDKIDVKI
LGVDAQGQQLSLGIKQTQSNPWDVVLEKYPENAEVTGKVRNLTNYGAFIELEEGIDGLLH
VSDMSWTRKISHPSEVLTKGQVVKCRVLSVDQARRRIALGLKQLDDDPWNTTIPAKYQPG
QLVSGKVTKITNFGVFVGLEDSLEGLLHISELADHKVENPEDVVKVGDEIEVKVLRVDSD
ERKIGLSRKRVDWSEEQMQAEAEKEAQQAASAAKSEKPAVELKGGLGSDGPLIGPPT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaccgcactcttatccgctctttggaagatgatctcttagagcaggaactcgac
atgatgttcggcgataccgccgaagaactcattctcgattcgctcgaagatgcaaaccga
cagttcgacgtcaaccaaatcgtcgaaggtaaaatcgttgaaatcaacgatgaattcgtc
gttgtcgacgtcgggttcaagagcgaaggtgctatccataaaaacgaatgggaagaaggg
gagccacccccgcaaatcggtgacaccgtcaaggttctgatcgaagaagtcgaagatcag
cacaccgctcccgaagattcccgagcgatgatcagcctcagcaagaagaaggctgaaaag
atcatccagtgggaaaagatgatggcctcggtccaagaaggccaagtcgttaccggtact
gtgatccgcaagatcaagggtggtttgctggtcgacatcggcgtcaatgtcttcttgcca
gctagccaagtcgacatccgtcgtcccaacgatatcggcgattacatcggccgagttgtg
cagtgcgaagttcttaagatcgacgaaacccgtcgcaatatcgtcgtcagccgccggtcc
ctcatcgagaagcaacgcgaagaagatcgcgaacacctcatggcggaactcgaagtcggc
cagatccgaaagggtattgtcaagaacatcgccgacttcggtgcgttcgtcgacttgggc
ggtatcgatggtctgctccacatcaccgacatgagttgggagcgaatcggtcaccccacc
gaaatggtggcaatcgatcaagaaatcgaagtcaagattcttcaaatcgaccgcgaaaag
caaaagatcgctctcggtctcaagcaaaagcaaaacaacccttggaccaacatcgccgac
aagtatccagtcggttccaccgtccctggcgaagttgtcaatgtaatgagctacggtgcg
ttcgtgaaactcgaaccgggcatcgaaggcttggtgcacatctccgaaatgtcatggacc
cgccgtatcaaccatccaagcgagatggtacagatcggcgacaagatcgacgtcaagatc
ctcggtgtcgatgcccaaggccaacagctttctctcggtatcaaacaaacccaaagcaac
ccttgggatgtggttttggagaagtaccccgagaacgcagaagtcaccggcaaggttcgc
aacctcaccaactacggtgcctttatcgaactcgaagaagggatcgatggtctcctccac
gtttccgatatgtcgtggacccgcaagatcagccatccgagcgaagttctcacgaaggga
caagtggtcaagtgccgcgttctcagcgtcgatcaagctcgccgccgaatcgcgttggga
ctcaaacaactcgacgacgatccatggaataccaccatccctgccaagtaccaaccagga
cagttggtgagtggcaaggtgacgaagatcaccaacttcggcgttttcgtcggattggaa
gattcgttggaaggtctccttcacatctccgaattggctgaccacaaagtggaaaaccca
gaagatgttgtgaaggtgggcgacgaaattgaagtgaaggttcttcgagtcgatagcgac
gagcgaaagattggactctctcgcaaacgagtcgattggtccgaagagcaaatgcaagct
gaagcggaaaaagaagcgcagcaagcggcatcggcagccaagtcggaaaagcctgccgtc
gaactcaagggtggcctcggaagcgatggtccactcatcggcccgccaacctaa
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