Pirellula sp. SH-Sr6A: VN12_17970
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Entry
VN12_17970 CDS
T04360
Name
(GenBank) ABC-type uncharacterized transport system
KO
K25151
gliding motility-associated transport system permease protein
K25153
gliding motility-associatede transport system auxiliary component
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_17970
Transporters [BR:
pir02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Gliding motility-associated transporter
VN12_17970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_transp_aux
DUF7088
ABC2_membrane_5
ABC2_membrane_3
ABC2_membrane_2
ABC2_membrane_4
ABC2_membrane
DUF7018
Motif
Other DBs
NCBI-ProteinID:
AMV34022
UniProt:
A0A142Y4T8
LinkDB
All DBs
Position
complement(4474349..4477264)
Genome browser
AA seq
971 aa
AA seq
DB search
MTLTYVLTALIKLLVLDLVFLGVILAIIMALAMTRRVGYAVLKRNFYGYFSNPTGYVFLC
LFVLLTSMAAFWPHEFFSSNLGTLGQLNKWFTYIMLFFIPAITMSIWAEERRQGTDELLL
TLPADDFDIVIGKYVAAAAIYSVSLLFSQFSTFIVLAFLTQGEIDTGLFFTNYVGYWFIG
LAMIAIGMVASFLTNNLTVGFILGAVFNAPLAFAFKADTIADRSIAREIKNFSVPERFDD
FGRGVLSLSSVSYFILVAAFGLYLCMILIGKRHWSGGRDGNQRLGHYLFRLAAIALIVIA
GTMLFQNNDRRIDATEMKVSSISPVTEELIASLGKEREIVVDAYLSAEVPEEYAKIKYQV
ISLLKEFKSAAQAADVTMQLRIYDSVQPSSEEEKQAEQQYGIVPQTIRVRERGAYSDQPI
MLGAAFRSGLQKVVIPFFEPGVPVEYELVRSLTTVSKPARKKLGVLSTEAKMMGGFDMRS
MQSMPQQPIIDELAKQYEIVSINAASPIDIEKLDVLLAVQPSSLSPEEMTNFIDALKSGL
PTAIFEDPVVALESIIGTGDPKQAGGPMAMFGGGGAQPKGDMRPLWRELGLEIPGRPGAM
GLLAPDLCWQEYNPYPVLAETSEASDLWIFAREEAPGADGAFNSDNEISKDLTELMFLYS
GVIRPLPESETSVVVTPLVQTGLKAGIITQQDLNSIERSGLSRATETKLRLGESTGAQVL
AAWIEGKASGASDPKAAEKKDGEEGAQPAAGTRSIKAVYVADVDCLTRTFVDIRNRPQML
EDIKFQFQNITFVLNAIDVLAGETKYPQVRRHIPTFSTLKLVEAQAEKARQIEASKRAEF
SKNFTEAIAKAEDENAKSEREFKERIDKLASDGSIDASQFADLERLRQQAAIKQQNTVKR
FRVEKDRLQRERDQGIRNARREADDAISKIQNYYKLLAVFVPPIPPLVVGIVVLVSRRLR
EREGISKNRLK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
gtgacacttacatacgttctgactgctctgatcaaactcctcgtcttagaccttgtgttt
ctcggagtcatcctggcgatcattatggccctggcgatgacgcgtcgcgtcggatacgcg
gttctcaagagaaacttttacgggtatttttcgaacccgacaggctatgtttttctctgc
ttgttcgtattgttgacgagcatggcagcgttttggccccacgagttctttagctcgaac
ttggggacgcttggccagttgaacaagtggtttacgtacatcatgctcttcttcatccct
gcgatcacgatgagcatttgggcggaagaacgccgacagggaaccgatgagctactccta
acgctccccgccgatgactttgatatcgtcattggaaagtacgtcgcagcggcagctatt
tattcggtttcccttctcttctcccagttttcgaccttcatcgttctcgcgttcctcacg
cagggtgaaatcgataccgggttgttctttaccaactacgtcggttactggttcatcgga
ttggcgatgatcgcgatcggtatggtcgcgtcctttctcacgaacaatctaaccgtcggt
tttattctgggggcggtgttcaacgcacccctcgctttcgcgttcaaagcggacacgatt
gcggatcgttccatcgctcgcgagatcaagaacttcagtgtaccggagcgattcgacgat
tttggccggggcgtgctaagcctgtcgagcgtctcgtatttcattctcgtcgcagccttt
ggactctatctctgcatgatcttgatcggcaagcgacattggagcggcggacgcgatggg
aaccagcgactcggacattatcttttccgcctcgcggcgatcgcgttgatcgtgattgca
gggaccatgttgttccagaacaacgaccgccgaatcgatgcgaccgaaatgaaggttagt
tccatttccccggttaccgaagaactcatcgcttcgctgggcaaggaacgcgaaatcgtc
gtcgatgcgtacctgtcggccgaagtccccgaagagtatgcgaagatcaagtatcaagtg
atctcgcttttgaaggagttcaaatcggccgctcaagctgcagatgtcaccatgcagctt
cgcatctacgactccgtgcaaccctcgagcgaagaagagaagcaagcggaacagcaatac
ggaatcgttccacaaacgatccgagttcgcgagcgaggagcttattccgatcaacccatc
atgttgggagcagcattccgaagcggattgcagaaagtggttatccccttcttcgaaccc
ggtgtccctgtcgaatacgagcttgtccgatctttgaccaccgtttcgaagccagcccga
aagaagttgggggtactcagtacggaagcgaagatgatgggtgggttcgatatgcgcagt
atgcagtcgatgccgcagcagcccatcatcgatgagttggcgaagcaatatgaaatcgtt
tcgatcaacgcggcatcgccgattgatatcgaaaagttagacgttctactcgccgtgcaa
ccttcgtctctctcgcccgaggaaatgaccaacttcatcgatgcgttgaagtcgggattg
ccgaccgcgatctttgaagaccccgttgtcgcgttggaatccatcatcggcacgggcgat
ccgaaacaagccggtggaccgatggcgatgttcggtggtggcggagcccaacctaaggga
gatatgcgtccgctttggcgagaactagggctcgaaattccgggacgacccggagcgatg
ggcttgcttgcccccgatctctgctggcaagagtacaacccgtaccccgtgctcgcagaa
acgtccgaggcgagcgacctttggatctttgctcgcgaggaagccccgggtgcggatggt
gcgttcaatagcgacaatgagatcagcaaagatttgacagagctcatgttcctttactca
ggggtcatccggccattgcccgagtcggaaacgagcgtcgtggtcacgcctttggtccaa
accggattgaaggcgggaattatcacccagcaggacctcaacagtatcgagcgttccggc
ctttcccgagccaccgaaaccaaacttcggctgggagaaagcacgggtgctcaagttctg
gctgcttggatcgaagggaaagcgagcggagcatccgacccgaaggcggcggagaagaaa
gatggggaggagggggctcagcccgctgccggcacgcgttcgatcaaggccgtgtatgtt
gccgacgtcgattgcttgacccggaccttcgtggatatccgaaaccgaccccagatgctg
gaggatatcaaattccaattccaaaatatcacgtttgtcctcaacgcgatcgacgtgctg
gctggcgagaccaagtatcctcaggtgcgacggcatattccgacgtttagcacgctgaag
ctagttgaggcccaagccgagaaggctcgacagatcgaggcctccaagcgtgcggaattt
agcaagaactttaccgaggcgatcgccaaggccgaggatgaaaatgcaaaatcggaacgc
gagttcaaagagcgaatcgacaaactggcttccgatggcagcatcgatgcgtcgcagttc
gcggacttggaaagactgcgtcaacaggccgcgatcaagcaacaaaacaccgtgaagcga
ttccgtgttgagaaagaccggctgcagcgagaacgcgatcaagggatccgcaatgcacgg
cgcgaagcggacgatgcgatttcaaagatccaaaactattacaagctgctggccgtgttt
gtgccgcccattccgccacttgttgttggcattgtcgttctcgtctcgcgtcgattgcga
gaacgagaaggtatttcgaagaaccgactcaagtag
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