Pirellula sp. SH-Sr6A: VN12_18560
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Entry
VN12_18560 CDS
T04360
Symbol
kdsC
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00541
Biosynthesis of various nucleotide sugars
pir01100
Metabolic pathways
pir01250
Biosynthesis of nucleotide sugars
Module
pir_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VN12_18560 (kdsC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pir01005
]
VN12_18560 (kdsC)
Enzymes [BR:
pir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
VN12_18560 (kdsC)
Lipopolysaccharide biosynthesis proteins [BR:
pir01005
]
Lipid A
VN12_18560 (kdsC)
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Paralog
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Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
Motif
Other DBs
NCBI-ProteinID:
AMV34139
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Position
4620566..4621093
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AA seq
175 aa
AA seq
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MAPKDNDVAKPIKLILSDVDGVLTDGSITIDNAGIESKTFHVRDGHAIRLWCKAGFQFGL
LTARNSHIVKIRAAELGITLVRQGFEDKLPAAREMIQQAGCEPHEVCYIGDDLPDLSVMY
EVGLSATVEDAASEVRQNAKWVMTSPGGRGAIRELVERLLKAKGLWDECIPNRVS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtggcacccaaagataacgacgtagccaagccaatcaaactgatcctttcggatgtcgac
ggcgtcctgaccgatggctccatcaccatcgacaacgcgggaatcgaaagcaaaaccttt
cacgtgcgggacggacatgccattcgactttggtgcaaggcggggtttcaattcgggttg
ctcaccgcgcgcaactcgcacatcgtcaaaattcgcgctgcggaactaggtatcacgctg
gtccgccaaggttttgaagacaaacttccagccgcgcgcgagatgatccaacaggcgggg
tgcgaaccgcacgaggtatgctacatcggtgatgatcttcccgatctcagtgtgatgtac
gaagtcggattgagcgcgaccgtagaggacgctgcgtccgaggttcgccagaatgcaaag
tgggtcatgacctccccgggaggacgaggagcgattcgcgaactggtcgagcgattgctg
aaagcaaaggggttatgggatgagtgcatcccgaatcgagtctcatga
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