Pirellula sp. SH-Sr6A: VN12_21035 Help Entry VN12_21035        CDS       T04360                                  Symbol uvrA_1 Name (GenBank) UvrABC system protein A   KO K03701   excinuclease ABC subunit A Organism pir  Pirellula sp. SH-Sr6A Pathway pir03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pir00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     VN12_21035 (uvrA_1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pir03400]     VN12_21035 (uvrA_1) DNA repair and recombination proteins [BR:pir03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      VN12_21035 (uvrA_1)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       VN12_21035 (uvrA_1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter ABC_tran UvrA_DNA-bind SMC_N AAA_29 nSTAND1 AAA_21 RsgA_GTPase AAA_16 AAA_23 AAA_25 Viral_helicase1 DnaJ_CXXCXGXG Motif Other DBs NCBI-ProteinID:  AMV34623 UniProt:  A0A142Y5X2 LinkDB All DBs Position complement(5150126..5156179) Genome browser AA seq 2017 aa AA seqDB search MATTRDLPIVVRGAREHNLQNVDLTLARNQLICFTGVSGSGKSSLAFDTLYAEGQRRYLE SLSTYARQFVGQIPKPDVDYLSGLSPSISISQKSTGNNPRSTVGTITEIHDFLRVLFARV GTGFCPDCQIQISSQTRDQMVEKIMGLDRSKPYLFLAPIVRGQKGEHRDLFEDLRKQGFN RARIDQRVYLLSEPPSLERQIKHHVELVVDRISVEASSRQRIAEAVDTAIRFGEGTLLLA PMVPGEDDTATYDTADDIVFSTSYACASCGKSYPPPSPQLLSFNSPQGACQECEGLGESF RYDPELLIQLPDKSIKNGAIPLIGKHSEMTRWYRRSISLYCATIEGSLGLETGSLLSTPW SKLSEAEQEALLNGYQGESVRVKGKALHGQDFRGIVPELRDTYRATSNPFTRANHERCMR IGRCPACDGSRLNAQARSIRLKTHAKGFHNVPWYSIGGVSRLSIDRCSEFFEGLELSPLQ WQIGEEAVKEIRARLRFLIDVGLGYLSLDRTAPTLSGGESQRIRLASQIGSGLVGVLYVL DEPSIGLHPRDNDRLLASLQRLRDLGNTLIVVEHDEDTMRIADTIVDFGPGPGVRGGKLI ASGTLDDIISNDESLTGGFLNRTRRIRSPESRRPGNGKKIKILGAEHHNLKNLDVDIPLG CFIAVTGVSGSGKSSLITEILSPAIRGVFQRGVEESGKHREIQGIEHIDKVIDIDQSPIG RTPRSNPATYVKVFDEIRSLFAELPESKRRGFDAGTFSFNTEQGRCSACEGHGAVRLDME FLADLWVPCAVCEGKRYDRATLQVEYKGKSIADCLELDVQQALEHFSEFPKIASKLETLH GVGLDYLKLGQPSPTLSGGEAQRIKLSKELSRRSTGKTVYVLDEPTTGLHFYDIDLLLGV LQSLVELGNTVIVVEHNLDLIQAADWVIDLGPEGGEAGGQVVCTGTPEEVSRCKASHTGK ALARYFESHRKVSKKKKATPKTKTKKEQKDAPALQDIHVVGAEHHNLKNVDLTIPRNRMT VFCGQSGSGKTSMAMDTLYAEGQRRFVESLSPYVRQFVGQMPKAKVARVDGLSPSVAIEQ RNLSHTPRSTVGTVTEIYDYVRVLFARLAQMHCTQCDAPVSSQTSDQILDRIRDLAAAQG TGRALLLAPVAPNANTDLTSFLTSLRQQGFVRMRINGKVYPLDDIPTLQYQSRNEFQLVV DRLQWDRLDPKSLRDSVDTALTMGNGILQIAMVDDSRSEVHWEVKTMSLQLACHACGISF QPLTPHRFSFNSQVGWCEACLGIGSMRGIDPNAAFETEKSLLEGGLPIWPDLQSPLSRAM LYALGRETGLPLDRPIKQLTAGQRAMLLKGLPNRQFVVTQGDLAAAIDPNAAPNSKVYMT FAYRGVYAAVESASSSNIRDRYALANFINEGPCIDCGGARVCSEAAHARYRNHTISDIVK LPIGSLNERVLSWKLSKREQKIAGELLREIQHRLQFLCDVGLEYLTLDRSANTLSGGEAQ RIRLASQLGAGLSGVLYVLDEPTIGLHPRDNDRLIRAMKSLRDLGNTLVVVEHDREVIAQ SDQLRDFGPASGPLGGNVVAQGTPAQIARAKNSVTGPFLSGKKKITPPSTRRVSLDDAIH ISKHDWTDIAITPHGWLTVKGAEANSLKGIDVSIPIGCFTAVTGPSGSGKSSLINGILYP ALARYFYATDGVPGPFREIRGHLHFKKVLKVDQSPLGASPSSNPATYTGVFDHIRQLFQR LPEAKTRGLTAGHFSFNVSGGRCEKCEGLGQVCIQMHFLPDVWISCDACNGRRYTSEVLA VKFKGHSIDDVLNMSIGEARDLMSEIPKIHHMLSTLCDVGLDYLALGQSAPTLSGGEAQR VKLATELCRPNNGKTIYLLDEPTTGLHFNDIQKLLHVLQALVDSGNTVVVIEHNLDIIQC ADWILDLGPEAGEQGGELVFAGTPEKLIEYASNRSYGDAEGIALQVSEKKTRGRKAASKT DIASSAKPTGHRSYTGEALREFWEGTKRPSRPPSKPR NT seq 6054 nt NT seq  +upstreamnt  +downstreamnt ttggcaacgacgcgtgatctgccgatcgtcgttcgcggtgctcgcgaacacaaccttcaa aacgtagatctgacgctcgctaggaaccagctcatttgctttaccggcgtgtcgggcagc ggaaagagttcgctcgctttcgacacattgtacgccgaggggcagcgacgctatttggag agtctatccacttacgctcgtcagttcgtaggtcagattccgaagccggatgtggattat ctttccggactgagcccttcgatctcgatcagccaaaagtcgactgggaataatcctcgt tcgacggtagggacgatcaccgagattcacgacttccttcgcgttctctttgcacgagtt ggcacgggattctgcccagactgtcagattcagatttcatcgcagactcgcgatcagatg gtcgagaagatcatggggctcgatcgttcgaaaccctacttgtttctcgctcctattgtt cgagggcagaagggggagcatcgggatctgttcgaggatttgcgtaaacaaggctttaat cgagcacgcatcgaccaacgcgtgtatctcctttccgagcccccgtccctggagagacag atcaagcaccacgtggaattggtcgtagatcgcatttccgttgaagctagcagtcggcag cggatcgcagaagcggtggacactgcgattcgatttggtgaaggaacactcttactcgcc cccatggtccccggcgaggacgatacggcaacctacgacacggctgacgatattgtcttt tcgacgagttacgcgtgcgcttcgtgtggcaaatcctatcccccaccttctccgcaattg ttgagtttcaattccccacagggggcgtgccaagaatgcgagggcttaggggaatctttt cgttatgatcccgagctattgattcagctgccggacaaatcgattaagaacggtgcgatt ccactgatcggcaaacacagcgagatgacgcgatggtatcgccgatcgatctccctgtac tgcgcgacgattgagggaagcctgggattggagactgggagtctcctctcgactccttgg tcgaaactctcagaggcggagcaagaagcgctgctcaacggttaccaaggggaatcggtg agggtaaagggcaaagcgttacatggacaagacttccgtggaatcgtacctgagttgcgc gatacttatcgcgcgacgtcgaatccatttacgcgtgccaaccatgagcgctgtatgcga atcggtcggtgtccggcatgcgacggttctcgattgaatgcacaagcgagatcgattcga ctgaagacgcacgcgaagggcttccacaacgtcccttggtattcgatcggtggcgtttcc cgcctctcgatcgatcgatgcagtgaattttttgaaggtttggaattgagcccactccaa tggcagattggagaggaagcggtcaaggagattcgagcgaggcttcgatttttgatcgat gttggtctcgggtatctttcgctcgatcggacggctccgactttgtcaggcggagaatcg cagcgtattcggcttgctagccagatcggatccggactggtaggggtgctctacgtgttg gacgaaccgagcattgggctccacccgagggacaacgatcggttgctcgcctcgctccaa cgtttgcgcgatctagggaatactctgatcgttgttgaacacgacgaagacacgatgcgc atcgcggacaccatcgtcgatttcggtccgggacctggtgttcgaggggggaagctaatc gcgtcggggacgctcgacgacattatttcgaatgacgaaagcctgacgggaggctttctc aatcgaacccggcgcattcggtcccccgagtcgcgacggcctggaaacgggaagaaaatc aagattctcggagcggaacatcacaatctgaagaacctcgatgttgatattccactcggg tgcttcatcgccgtcaccggtgtgagcggcagcgggaaaagctcattgatcaccgagatc ctatcgccagccattcggggtgtttttcagcggggtgtggaagagtctggaaagcaccgc gaaatccaagggatcgagcatattgataaggtcattgatatcgatcaaagtcccattgga cggaccccgcgcagcaaccctgcaacctatgtcaaagtctttgacgaaatacgttcccta tttgccgaattgcctgaatccaaacggcgaggattcgatgcgggcacatttagtttcaat acggagcaaggccgatgttcggcttgtgaggggcatggagcagtacggcttgatatggag tttctcgccgacctttgggttccctgcgcggtatgcgaaggaaagaggtacgaccgagcg acattgcaggtggagtacaaagggaaatcgatcgccgattgcttggagctcgatgtccag caagctctcgagcacttcagcgagtttccaaagatcgcgagcaaactagagacgttgcac ggagtcggattggattacctcaagctggggcaaccgtccccgaccctatcggggggcgaa gcgcaacgtatcaaattgtccaaggagctgagtcgtcgatcgacgggcaagaccgtgtat gtgctggatgaaccgacgacgggcttgcacttctacgacatcgatttactactcggcgtg ttgcagtccctggtggaattgggaaacacggtgatcgtcgtcgagcacaatctcgatctg atccaagcagccgactgggtgatagacctgggaccggaggggggagaggctggtggtcag gtcgtttgcacagggactccagaagaggtttctcggtgcaaagcgtcgcataccggaaag gcacttgcacggtatttcgagtcgcaccgaaaagtatcgaagaaaaagaaagctacgccg aaaaccaaaacgaagaaggaacaaaaagatgcaccggcgttgcaggatattcacgtcgtt ggcgcggaacatcacaatttaaagaacgtcgatttgaccatcccccgcaacagaatgacc gttttttgtggtcaaagcggcagtggaaagacgtcgatggcgatggatacgttgtatgcg gaagggcaacgtcggtttgtggagagtttgagcccgtatgtacggcagtttgtcggtcaa atgcccaaagccaaggttgctcgggtcgatggtttgagtccctccgtggccatcgagcag cggaatctatcgcatacaccgcgcagcacggtcgggacggtaacggagatttacgattac gttcgtgtgttgtttgcccgtcttgcccagatgcattgcacgcagtgcgatgcgccggtg agcagccagaccagcgatcaaatcctcgatcgcattcgagacttagcggctgctcaaggc actggccgggcattgctgctcgccccggtcgccccaaatgcaaacaccgacctcacgagc ttcctcacatcgctccgccagcaaggcttcgtgcggatgcggatcaacggaaaggtgtat ccgctcgacgatatacccaccttgcaataccagtcgcgaaatgaattccagttggtggtc gaccggttgcagtgggatcggctcgatcctaaaagtttgagggacagcgtcgatacggcc ctcacgatgggaaatgggattttacaaatcgccatggtcgatgactcaaggtcagaggtg cactgggaggtcaaaacgatgtcgctgcagctcgcctgccacgcgtgcggcatctcattt cagcccctgacaccgcacagattttctttcaattctcaggtcggctggtgcgaagcctgc ctgggaatcggttcgatgcgcgggatcgatcccaatgcggctttcgaaacagagaagagt ttattggaaggaggattgccaatttggcccgatcttcaatctcccctctcgcgagccatg ttgtatgcgttggggcgtgagaccggattgccgttggatcgacccatcaaacagttaacg gccgggcaacgcgctatgctcctcaagggccttccaaatcgtcaatttgttgtcacccaa ggggatttggcagcggcgatcgatccgaatgcggctccgaattcgaaggtgtatatgaca tttgcctatcgaggcgtttacgcggctgtggaatccgcatctagttcgaacatccgcgat cgatacgcgttggcaaacttcatcaacgagggaccatgcattgattgtggtggtgcacgg gtttgttccgaagcagcccacgcccgatatcgcaatcatacgatctctgacattgtcaaa ttaccaattggatcgttaaatgaacgggtgctcagttggaagctttcgaagcgcgagcaa aaaattgcaggcgaacttctgcgcgaaatccagcatcgcttgcaatttctatgcgatgtg gggttggagtatttgaccctagatcgctcggcgaacaccttgagcggaggcgaagcacaa cgtatccggttggccagtcaactcggcgccggattgagcggcgtcctttatgttttggat gagccgaccatcgggctgcatcctcgtgataacgatcgactgattcgggccatgaagtcg cttcgggacctggggaataccttggtcgttgttgagcacgatcgcgaggtgattgcgcaa agcgatcagttgcgagactttgggccggcgtccgggccgcttggaggcaatgtggtcgcg cagggtactcccgcacaaatagcccgcgcgaagaactcggtaacgggaccttttctgagt ggtaaaaagaagatcacacccccttcaacccgtcgtgtttccctcgacgatgcgatccac atatccaagcacgattggaccgatatcgcgatcacaccgcacggttggttaacggtgaaa ggagccgaagcgaactctctcaagggaatcgatgtgtcgatcccgatcggttgtttcacc gcggtgacgggtccgagcggaagtggcaagagtagcttgatcaacggaattctgtacccc gccttggcacgatacttttacgctacggatggtgtgccgggcccctttcgcgaaatcagg ggacatttgcattttaagaaagtgctcaaggtagatcagtcgccactgggggcgtctccg tcaagcaatccagcgacctacaccggagtctttgatcatattcggcagctatttcaacga ttgccggaagcgaaaaccagaggtctcacagccggtcatttcagcttcaacgtttcgggc gggcgatgcgagaagtgcgaggggttagggcaagtatgtattcagatgcactttctaccc gatgtttggatttcatgtgacgcctgcaacggacggcggtatacctccgaggtcctcgcc gtgaaattcaaagggcattcgatcgacgatgtgctcaacatgtcgatcggggaagcgaga gatttgatgagcgagatcccgaagatccatcacatgctttcaaccctctgcgatgtcggg ctggactatctcgcgttggggcaaagcgccccgacgttgagtggtggtgaggctcagcgg gtcaaattggcaaccgagctttgtcgccccaacaatgggaagaccatttatcttctcgat gaaccaacgaccggattgcacttcaatgacatccagaagctccttcacgtcttgcaagcc ttggtggatagcgggaacacggttgtcgtaatcgaacacaacctcgatatcatccaatgc gccgactggatcctcgacctcggcccggaggcaggcgagcaaggaggagaacttgtcttc gccggtacccctgaaaaactgatcgaatatgcttcgaatagaagctatggcgatgcggaa gggatcgctttgcaagtttccgaaaagaagacaaggggacgcaaagcggcttcgaaaacc gacattgcatcatccgccaaaccgacgggccaccgcagttatacgggcgaagcgttgcga gaattttgggaggggaccaagcggccgtcccgaccgccgagcaagcctcgatga

DBGET integrated database retrieval system