Pirellula sp. SH-Sr6A: VN12_21890
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Entry
VN12_21890 CDS
T04360
Symbol
rpsA_2
Name
(GenBank) 30S ribosomal protein S1
KO
K06959
protein Tex
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
VN12_21890 (rpsA_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
S1_RRP5
YqgF
HHH
HHH_5
HD_4
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AMV34794
UniProt:
A0A142Y6Q2
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Position
5351314..5353497
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AA seq
727 aa
AA seq
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MSSQNLVEVPFDLKAICTEIAKAIQVQSAQVVAAVELLDAGNTIPFIARYRKEATRGLDE
VALRFIQDSLEKARELHARKGTVLKTICELGALTPELQKQILTCEDLSTLEAIYAPYKPK
RRTRATLAKERGLEPLAQLLLRQANLGKPRLEVLKPYVQLELGVPDEEAALAGALDIVAE
QWSEDAETRIWIADLAMKRGLIVSKVKRGKKEAADKFEQYLDYRELVSKIPSHRFLAIQR
GETEGVLNASLEVDRDDVIAQMRSHFVRNPRFEFHRELNATVEDCFDRLLLPVTESTVMQ
KLKERSDEEAIQVFAKNLRELLLAPPAGPRVTLGVDPGFRTGCKLAVVDGTGKYLAHATI
YPTPPTSDAAGAEKIILGLIQRYKIELIAIGNGTASRETDSFFTNLLRSHQLSITKAMVS
ESGASIYSASELAGREYPDLDVTVRGAISIAHRLQDPLAELVKTDPKSIGVGQYQHDVNQ
SLLKKCLEREVESCVNRVGVDLNMASVSLLSFVSGIGPKLAENIVRFRDEKGRFADRQQL
MKVPKLGPKAFEQSAGFLRIREGAQPLDNSAVHPECYPLVERIAKHLRVPVEQMVGMQGI
EQKVRANDLADSSFGAMTITDVIQELSKPGRDPRREFQAVRFSDEVQSMEDLKEGMVLEG
LITNVTHFGAFVDIGVHQDGLIHISQLSNTFVKDPNDIVSVGDMVKVKVLEVDIPKKRIS
LTRKFQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccaaaatctcgttgaagtcccgttcgatttgaaagcgatttgcactgaaatc
gcgaaggctattcaagttcaatcggcgcaagtggtcgcagcggtggaattgctagatgcc
ggcaatacgatcccgtttatcgcccgctaccgaaaagaagcgacccgaggcctcgatgaa
gttgctttgcggttcatccaagattcacttgaaaaagcccgggagcttcatgctcgcaag
ggaaccgtgctgaagaccatctgcgaacttggcgccctcactcccgaattgcagaaacag
atattaacgtgcgaagatctttctacgctggaggcgatctatgcgccgtacaaacccaaa
cgtcgtacgcgagcgactcttgcaaaagaacgcgggctcgaacctttagcgcaactgttg
ctccgccaagccaaccttggaaaaccgcgtctcgaagtcctcaagccttacgtgcagttg
gagcttggggtgccggacgaggaagcagccttagcgggagctttagacatcgttgcagaa
caatggtcggaggatgcagaaactcgcatttggattgcggacctagcaatgaagcgcggt
ctgattgtctcgaaggtgaaacgtggcaagaaggaggctgctgataaattcgagcaatac
ctcgactatcgtgaactcgtttccaagatcccttcgcaccgattcttggcgatccagcga
ggcgaaacggaaggagttctcaatgcgagcttggaagtagatcgcgatgatgtaatcgct
caaatgcgttcgcactttgtcaggaatccaagatttgaatttcatcgcgaactcaatgcc
acggtggaggattgcttcgaccgtttgctattacccgtcaccgagtcgacggtgatgcag
aaactcaaagaacgttctgacgaagaagctatccaggtatttgctaaaaacctgcgagaa
ctgctccttgcccctcccgccggcccacgtgtaactctgggagttgaccctggatttcgc
acgggttgcaaactagccgttgtcgacggcaccggaaagtatcttgcgcacgcgaccatt
taccccacacctccaacctccgatgcagcgggtgccgagaagatcattctcggtcttatt
cagcgttacaaaatcgagctgatcgcaataggcaacgggaccgcgtcgcgagaaacggac
tcgttcttcaccaatcttctgcgatcgcatcagctttccatcaccaaagccatggtgagc
gagtcgggagcttcgatctattccgccagcgaactcgccgggcgtgaatatccggatttg
gatgtgaccgtgcgaggcgctatcagcatcgcgcatcgactgcaggatcccttagcagaa
ttggtgaagacggatcccaaatccatcggtgtaggccaataccaacacgacgttaaccag
tcgcttttgaagaagtgtttggaacgggaggtggagtcgtgcgtgaatcgagtcggggtc
gacctcaacatggcgagcgtctcattgttatcgttcgtttcaggaattggacccaagcta
gcggaaaacatagtgcgtttccgcgatgaaaaaggacgcttcgccgatcgccagcagctc
atgaaagtcccgaagcttggtcctaaagcattcgaacaatcggcgggttttctacgcatt
cgcgaaggtgcgcaacctctcgacaactccgcagtccatcccgagtgctatccgctggtg
gaacgcatcgcgaaacacttgcgtgtaccggtcgaacaaatggtcggcatgcaaggcata
gagcagaaagtgcgagccaacgatcttgccgacagttcgttcggcgcgatgacaatcacc
gatgtgattcaagagttaagcaagccgggacgcgatcctcggcgtgaattccaagcagtc
cggttctcggacgaagtccaatccatggaggacctcaaggagggaatggttttggaaggc
ttgatcacgaacgtgactcactttggagcgttcgtcgacattggagtccatcaagacggt
ttgatccatatctcgcaactttcgaacacgtttgtgaaagaccccaacgacatcgtctcg
gttggggacatggtgaaggtgaaagtcctcgaagtggatattcccaagaagagaatttcg
ctcactcgcaagttccaacagtag
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