Pirellula sp. SH-Sr6A: VN12_22060
Help
Entry
VN12_22060 CDS
T04360
Symbol
ntrC_2
Name
(GenBank) Nitrogen assimilation regulatory protein
KO
K07712
two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VN12_22060 (ntrC_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pir02022
]
VN12_22060 (ntrC_2)
Two-component system [BR:
pir02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
VN12_22060 (ntrC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Sigma54_activ_2
Sigma54_activat
HTH_8
AAA_16
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMV34827
UniProt:
A0A142Y6H3
LinkDB
All DBs
Position
complement(5399898..5401391)
Genome browser
AA seq
497 aa
AA seq
DB search
MILVGEARVLVIDDDPSMVPLVEGLLPKGVSIIGARTLQKGKSLAADHRFDVILLDQLLP
DGAGLECIEALLSNDRLRPILFVTAQSDASTAIEATRKGAFDYLPKPLDFSFLQQRLLEA
LEYRELMRTPVVLDDPMNPSQEILVGRCRLMQEVYKSIGRLAAIRNAVLIEGEPGTGKEL
VARTIHQYGEFRSFPIEKHMANDIDSLIAELSNPKPIDHKEGQHRTILVEDIEHLSLANQ
SRILQLLRDETESSPRRTRWFFTTSTSTRHLLDRGVLRSDFFYLLSSTLIALPPLRRRDG
DLELLVSHFLQKASQIRSTQDGHTPRVSPEAMHLLREYSWPGNVAELKSVLDRVLLESRG
VIQANDALRGLLSDLRTNDTPSHAKDRHGLESPNSDSAASASNTPLKSFDLLAYAKEQLK
DRQVSSLYDLCIEKLELTLLPLVLHHTSGNRAAAARILGMTRTSLRKKMLTLGLIADESM
DDPEAGPEATSESGAGV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgattttggtcggagaagccagagttttagtcattgatgatgaccccagcatggttccc
ctagtcgaaggacttttgcccaagggggtgagcatcatcggtgcacgcacgcttcagaag
gggaaaagcctcgctgcggatcatcgtttcgatgttattcttctcgatcaactgcttccg
gatggcgcgggattggaatgcatcgaggctctcctttcaaacgatcgacttcggcccata
ttgtttgtcacggctcaatccgatgcgagtaccgccatcgaagccacgagaaagggagct
ttcgactatctaccgaagccgctcgacttttcctttctccagcaacgcctcttggaagcg
ctcgagtatcgagagttgatgcgaacccccgtcgtactcgatgaccccatgaatccgtcc
caagaaattttggtgggacgatgccgattgatgcaggaggtgtacaagtccatcggtcga
ttggcagcgattcgaaacgccgttctgattgaaggggaacccgggacaggaaaggaactc
gtcgcgagaaccattcatcaatacggcgaatttcgatcgtttccgatcgagaaacacatg
gcgaacgatatcgattcgctgatcgcagagctctcgaatcccaagccaatcgatcataag
gaaggacagcatcggaccattctcgtcgaggatatcgagcatctctccctcgcaaaccaa
tctcgcatcttgcaattgcttcgcgacgagacagagtcatcgcctaggcgcacgaggtgg
ttttttacgacttccacatcaactcgccatctgctcgacagaggtgtgctccgtagcgac
tttttttatctattgagttcgacactcatcgcccttcctcccctccgaaggagagatggc
gatctcgagctgctggtttcccatttcctacagaaggcgtcccaaattcgatcgacgcag
gatggccatacgcccagggtcagccccgaagcaatgcatttgctacgtgaatactcgtgg
cccggaaatgtggccgaactaaagagtgttttagatcgtgttttgctcgagtccagagga
gttatccaagcgaacgatgcgctacgaggtctgctcagcgatcttcgaacgaatgacact
ccgtcgcatgcgaaggacagacatggattggaatcaccgaattccgactccgccgccagt
gcgagcaacactcctctcaagtcctttgacctactggcctatgcgaaagagcaactaaag
gaccgacaagtatcttctctgtatgacctttgcatcgaaaaactggaattgaccttgctg
cccttggtattgcaccacacatcgggaaacagagctgccgcagctcgcattctgggtatg
acgcgaactagtcttcggaagaagatgctgacgcttggtttgatagctgacgaatccatg
gatgatccggaggcaggaccagaggctacgagcgaaagcggagctggcgtgtga
DBGET
integrated database retrieval system
